PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029264-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 610aa    MW: 67961.9 Da    PI: 7.4192
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029264-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS425.15.6e-1302396081373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+elL+ecA+a+s++ +   ++l+++ +  +s +g+p+qRl ay+ e+L ar ++s++++y+al+++e      ++ l+++++++e++P+lkf++
  AUR62029264-RA 239 LKELLIECARALSENRMDDFEKLVEQARGEVSISGQPIQRLGAYMIEGLVARKQSSGNNIYRALRCKEPL---GKDLLSYMHILYEICPYLKFGY 330
                     5799*****************************************************************8...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+Hi+Df+i qG+QW++LlqaLa+Rp+g+p +RiTg+++p s+  +  +le++g+rLa + e+ ++p+ef++ v   l d
  AUR62029264-RA 331 MAANGAIAEACRNENRIHIVDFQIAQGTQWLTLLQALAARPGGAPYVRITGIDDPVSQyaRGASLEAVGKRLAALSEKYKIPVEFHA-VPVFLPD 424
                     *******************************************************9999999*************************.7999*** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ e+L+v+pgEalaVn+ lqlh+++desv+++++rd +L++vksl Pkv ++veqe+++n+++Fl+rf+eal+yysa+f+s+++++pr+ +eri
  AUR62029264-RA 425 VTREMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLAPKVTTLVEQESNTNTTPFLTRFTEALNYYSAMFESIDVTMPRDRKERI 519
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+++ivnv+aceg+er+erhe ++kW++r+++aGF+++pls+++++ ++ llr ++ + y++ e++g+++lgWkdr L+s+SaW
  AUR62029264-RA 520 SVEQHCLAKDIVNVIACEGKERVERHELFGKWKSRFTMAGFQQYPLSSYVNSVIRGLLRCYS-EHYTLVEKDGAMLLGWKDRMLISASAW 608
                     **********************************************************9999.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    
MIGIGARRKI LYHRISILTG NTYKGYSLCY SMDSHKIVGY NVTGADSSYI SSQHTSSPIP  60
NRIIGPLKFS FRNSPSSPFS PHFDCDTVTT LSDSREQHSS SESLSGKSPS CNSSLETTSY  120
CQRLNSSPSE DSHQTAVLRT SSGTLFAHKT DYEVNIRHAL QELETVLMGD EAIGGNRQPQ  180
IPSQRLGSWN REPQGSLGAQ AQSSSPSGER RSEEGGQSEK RHKAVEEEIQ QLQIPSGNLK  240
ELLIECARAL SENRMDDFEK LVEQARGEVS ISGQPIQRLG AYMIEGLVAR KQSSGNNIYR  300
ALRCKEPLGK DLLSYMHILY EICPYLKFGY MAANGAIAEA CRNENRIHIV DFQIAQGTQW  360
LTLLQALAAR PGGAPYVRIT GIDDPVSQYA RGASLEAVGK RLAALSEKYK IPVEFHAVPV  420
FLPDVTREML DVRPGEALAV NFPLQLHHTP DESVDVNNPR DGLLRMVKSL APKVTTLVEQ  480
ESNTNTTPFL TRFTEALNYY SAMFESIDVT MPRDRKERIS VEQHCLAKDI VNVIACEGKE  540
RVERHELFGK WKSRFTMAGF QQYPLSSYVN SVIRGLLRCY SEHYTLVEKD GAMLLGWKDR  600
MLISASAWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.11e-164GRAS family protein