PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62029222-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 623aa MW: 68972.5 Da PI: 8.244

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62029222-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.6	5.6e-10	430	462	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ ++++ LA+++gLt +qV++WF N R + AUR62029222-RA 430 HPYPTDNDKQMLATQTGLTRNQVSNWFINARVR 462 89*****************************88 PP
2	BELL	95	6.6e-31	285	353	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + +++kakLl+++e+V+kr+kqy++q+q+vis+F+ v gl +a+pY+s k+iSrhFrcLk+aia+q+ AUR62029222-RA 285 DCHERKAKLLHMQEKVCKRHKQYHQQMQMVISAFDSVPGLSNATPYISRSIKTISRHFRCLKNAIADQL 353 6789***************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MEMSNNFMPE LHVAQQRRRD KLRVQHLDEL QHMNSFDHLH NSNSNTTTSS MMMLLPSPEM 60 LSFTSASNSF PNIHPTRFVT PSSSDSCDPQ QLPPPRCDDN WVQRHVSPAV PQFMSNDVGS 120 HPHGQGLSLS LSSNQLCEYR HLGGDPPELK PFESGSILSV VKQSMSSGTA TLECGTANNN 180 TNNQVQDVAG SSIQVHRNVG PLGPFTGYAA ILKSSKFLKP AQLMLDEFFS AASLSRGGEE 240 VENDQSLTIS RSRNVGDCST VVASKMDGSN ELSCKSSSCE SYRPDCHERK AKLLHMQEKV 300 CKRHKQYHQQ MQMVISAFDS VPGLSNATPY ISRSIKTISR HFRCLKNAIA DQLKHIKRAL 360 GEDLTSPTSF LRGDSSSSLR YDQNFAKVRS GAIGGTGQVG HQSHVWRPQR GLPERAVSIL 420 RAWLFDHFLH PYPTDNDKQM LATQTGLTRN QVSNWFINAR VRLWKPMVEE IHMLETKGSS 480 RSEPNSNNSV MSIIEKNRQA TAANQSGCKP SPLNPVCDKQ LECLGPSSSL ERSTGEPINT 540 EQLFQNQKCS RLESHQVPTN IDSSFIGFLP YQRRGLELGG IGAVSLTLGL RHGSETTQQQ 600 LQHQFIPQGM PFGGHVIHDF SG*

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MEMSNNFMPE LHVAQQRRRD KLRVQHLDEL QHMNSFDHLH NSNSNTTTSS MMMLLPSPEM  60
LSFTSASNSF PNIHPTRFVT PSSSDSCDPQ QLPPPRCDDN WVQRHVSPAV PQFMSNDVGS  120
HPHGQGLSLS LSSNQLCEYR HLGGDPPELK PFESGSILSV VKQSMSSGTA TLECGTANNN  180
TNNQVQDVAG SSIQVHRNVG PLGPFTGYAA ILKSSKFLKP AQLMLDEFFS AASLSRGGEE  240
VENDQSLTIS RSRNVGDCST VVASKMDGSN ELSCKSSSCE SYRPDCHERK AKLLHMQEKV  300
CKRHKQYHQQ MQMVISAFDS VPGLSNATPY ISRSIKTISR HFRCLKNAIA DQLKHIKRAL  360
GEDLTSPTSF LRGDSSSSLR YDQNFAKVRS GAIGGTGQVG HQSHVWRPQR GLPERAVSIL  420
RAWLFDHFLH PYPTDNDKQM LATQTGLTRN QVSNWFINAR VRLWKPMVEE IHMLETKGSS  480
RSEPNSNNSV MSIIEKNRQA TAANQSGCKP SPLNPVCDKQ LECLGPSSSL ERSTGEPINT  540
EQLFQNQKCS RLESHQVPTN IDSSFIGFLP YQRRGLELGG IGAVSLTLGL RHGSETTQQQ  600
LQHQFIPQGM PFGGHVIHDF SG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	1e-87	TALE family protein