PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029043-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 263aa    MW: 29576.7 Da    PI: 8.0163
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029043-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind232e-0723761102
                     TEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS
    HSF_DNA-bind  61 gFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102
                     gF+kv++ +         weF+h+ F+kgkk+ll++ikr+ +
  AUR62029043-RA   2 GFRKVSTAHPV------RWEFAHPGFQKGKKDLLKTIKRRVQ 37 
                     78999988865......8*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGFRKVSTAH PVRWEFAHPG FQKGKKDLLK TIKRRVQGNG TNSNARLLHQ KETEIEILKK  60
EQEALKVEIS DLKQQQQNSD TCLAAMGERM KTVEWKQQEF IMLLAKAMKK TNSFERLLQN  120
YRQNKVLGGG EVHKRRRLVS NDNFLESFIA KHGDQFHKEE VSAAHLELKS YLGSSAIDLG  180
SSLMSDQKSN LTSEISSPDL SSGSYIMWEK LMADDVICEG NREEAGFGVD QSKIVHELED  240
LIKPCSLIGY TNVGEIACPL GH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12935LKTIKRR
2134138KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.16e-21HSF family protein