PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62028980-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 472aa MW: 52877 Da PI: 5.0388 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.2 | 9.3e-16 | 202 | 272 | 15 | 88 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 l++pk+ ++ ++++ +tl++++g sW v+l++r gr+ l+kGW+eFv +n+L +gD+++F++++++ AUR62028980-RA 202 SLTIPKPVLNGKALSNK--EAVTLQNQEGSSWPVELRFRAD-GRVDLAKGWREFVIDNELIAGDTLTFEFVSNN 272 58999999977766643..47***************86655.689************************88754 PP | |||||||
2 | B3 | 43.6 | 5.2e-14 | 348 | 429 | 11 | 96 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++++ l +pk a++ ++++ + l+l d++gr+W ++++ r+++gr+ l++GW +F k g +gD+++F+++ ++ ++v + AUR62028980-RA 348 TRNSYLHIPKAIASRQKLEN--KDILVLCDPEGRKWLMEVRTRQSDGRVGLGRGWIDFTKTYGFGAGDTLIFEFVT--DRMMNVNI 429 567789*******9997773..348999*********************************************764..44445555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MDNKRKLSFK KASFIKVLED EFTKKLPLPP AFTKIFEDYI PLWLILEISG TRKCWRVDIE 60 KDENGSLCLS CGFNCFVKAH SVEVGNFLLF ELEEPSILQV KIYEKDGSEK TVGTTLESGY 120 EVGAFESPRK TPSTHREGEA SPWPTTPLGT NFESGYEVGA FESPTETPLI HKEGEASPWS 180 KTPIKKKGVK PEVFGSYIAY WSLTIPKPVL NGKALSNKEA VTLQNQEGSS WPVELRFRAD 240 GRVDLAKGWR EFVIDNELIA GDTLTFEFVS NNVIQVNVDR ASQVDNPSQR EQECKIEPME 300 LIDMTCENEE LAANCIINTN TPVTMDKFER VSLESKSPSF SLTWTEKTRN SYLHIPKAIA 360 SRQKLENKDI LVLCDPEGRK WLMEVRTRQS DGRVGLGRGW IDFTKTYGFG AGDTLIFEFV 420 TDRMMNVNII KVGGLNHAVT GDIDNATSVE ASLIAQKSQN SPWGSNVQSL F* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 3e-16 | B3 family protein |