PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028814-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 369aa    MW: 40820.9 Da    PI: 7.9303
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028814-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81e-072321446
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +a k +G++ W+ Ia+ +  gRt++ +k+r+ +
   AUR62028814-RA  2 QAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 32
                     68899****.*********.**********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MQAQKIFGNR WTEIAKVVSG RTDNAVKNRF STLCKKKAKR EALAKENSNA AAINVNNKRI  60
LIDSNGFRSQ SVDGIASPLK KFRREHIPNQ AVNFNSGNML LKTYGLTRQH PRPPFAVLAQ  120
NVRNVDKSLV STTKDALING DKKFDGTFLR KDDPKVAALM QQAELLSSLA VKVNMDNTEQ  180
NLENAWKVLQ NFFGRSKENE ELGHKIEESD LQLDDFKALV ESLRSSNDGI PLSQSQHEVY  240
ESPSSSEYST GSTNLSACDQ GEHSQGETST MHEDIVATSR SLQIADDGCV DMPHNKFLSC  300
ATADQEFNSP IQVTPLFRTL ASTIPSPQFS ESERHFLLRT LGIESPTQST ITNPMQPPPC  360
RKALLQGL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02820.22e-91MYB family protein