PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028488-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 327aa    MW: 36283.5 Da    PI: 7.2035
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028488-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B394.95.4e-3060177199
                     EEEE-..-HHHHTT-EE--HHH.HTT...............---.........--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...............ggkke.......esktltledesgrsWevkliyrkksgryvltkGWkeFvkang 73 
                     f+k ltpsdv+k++rlv+pk++ae++               +   +       +++ l +edesg+ W+++++y+++s++yvltkGW+++vk+++
  AUR62028488-RA  60 FEKPLTPSDVGKLNRLVIPKQHAEKYfplanatavadssgdK---TtgavaggGGVLLGFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKEKK 151
                     99***************************9999999986440...246666678899************************************** PP

                     --TT-EEEEEE-SS.SEE..EEEEE-S CS
              B3  74 LkegDfvvFkldgr.sefelvvkvfrk 99 
                     L++gD+v+F+++ r ++ +++++++r+
  AUR62028488-RA 152 LDAGDVVLFQRH-RfESDRFFIGWRRR 177
                     **********75.4588889****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDHHHHQKPL PFFYHSSLSL SSKLDDVDSD NNSTSTATAA IDRSETTSSS PSSADQEYMF  60
EKPLTPSDVG KLNRLVIPKQ HAEKYFPLAN ATAVADSSGD KTTGAVAGGG GVLLGFEDES  120
GKCWKFRYSY WNSSQSYVLT KGWSRYVKEK KLDAGDVVLF QRHRFESDRF FIGWRRRGSA  180
PSPHHHHPAQ TNNPIRYNNH QSNYSVAPSH GYNNGATHQH QIASFPSYRP DSLHAGTEVR  240
QKGRKSGGGN SKRVRLFGVN LECQIDDDLE EDEEPQTSDG SSLSSQGQAQ LHPGSGFGSG  300
YGATGPTTYN YFDYMGYQPN QHYPSHM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11580.13e-57B3 family protein