PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62028236-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 165aa MW: 18460.1 Da PI: 9.6559 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.6e-19 | 30 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r++lg+f+t+e Aa a+++a+++ +g AUR62028236-RA 30 SYRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDTPEAAALAYDQAALSTRG 80 69*******.**********44465..**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MIRVKEEEVT SSMSNTIKEE AAIITPSEKS YRGVRKRPWG KYAAEIRDST RNGVRVWLGT 60 FDTPEAAALA YDQAALSTRG TLAVLNFPVD VVRDSLKEMN YEFGNGCSPV LVMKNRLSIR 120 KKKSMCKKNR VKSRGSSLEN NVFVFEDLGS DYLEQLLTAS ETMH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-45 | ERF family protein |