PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62028193-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 501aa MW: 55449.8 Da PI: 4.9292

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62028193-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.9	1.1e-35	26	117	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sws ngnsfvv++ efak++Lpk+Fkh+nf+SFvRQLn+YgF+kv+ ++ w+F+++ F +g+k+ll++ AUR62028193-RA 26 FLSKTYDMVDDPSTDSVVSWSCNGNSFVVWNVPEFAKDLLPKFFKHNNFSSFVRQLNTYGFRKVDPDR---------WKFANEGFLRGQKHLLKS 111 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k AUR62028193-RA 112 ITRRKP 117 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MGESSLTVAM AASNGNSNGG STPAPFLSKT YDMVDDPSTD SVVSWSCNGN SFVVWNVPEF 60 AKDLLPKFFK HNNFSSFVRQ LNTYGFRKVD PDRWKFANEG FLRGQKHLLK SITRRKPVNA 120 HPHPQQSSIQ NTSAKSCVEV GKFGLEEEVE RLKRDKNVLM QELVRLRQQQ QTTDNQLQSV 180 GQRVQGMEER QQQMMSFLAK AMQRPGFLAQ IVQQQNESNR HVTGGNKKRR LPNHDEEGAG 240 TESMHTDYSD GQVVKYQPLI NEAAKSMLRE ILKLNGPLLD QSPKDPNNFL LDHVPAASSV 300 VDCGSSSTRT SGVILSEVAQ CSKQSFIPEE TGFSSNNALN SEIHSSCPVG SDPAKEIQIP 360 EIDLSSSQED ALMSELNQVL HPESSLKLPD MTFSVTQNPD VGFTDSLSTV QNGTLPKGSE 420 EYSPSPDLDV CLPGSNDVFW EQFFPMSPLG ENTEEVDSST PETGITRELE IGEDKGWEKL 480 HHMNHLTDQM GLLTAEMGRI *

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MGESSLTVAM AASNGNSNGG STPAPFLSKT YDMVDDPSTD SVVSWSCNGN SFVVWNVPEF  60
AKDLLPKFFK HNNFSSFVRQ LNTYGFRKVD PDRWKFANEG FLRGQKHLLK SITRRKPVNA  120
HPHPQQSSIQ NTSAKSCVEV GKFGLEEEVE RLKRDKNVLM QELVRLRQQQ QTTDNQLQSV  180
GQRVQGMEER QQQMMSFLAK AMQRPGFLAQ IVQQQNESNR HVTGGNKKRR LPNHDEEGAG  240
TESMHTDYSD GQVVKYQPLI NEAAKSMLRE ILKLNGPLLD QSPKDPNNFL LDHVPAASSV  300
VDCGSSSTRT SGVILSEVAQ CSKQSFIPEE TGFSSNNALN SEIHSSCPVG SDPAKEIQIP  360
EIDLSSSQED ALMSELNQVL HPESSLKLPD MTFSVTQNPD VGFTDSLSTV QNGTLPKGSE  420
EYSPSPDLDV CLPGSNDVFW EQFFPMSPLG ENTEEVDSST PETGITRELE IGEDKGWEKL  480
HHMNHLTDQM GLLTAEMGRI *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-125	HSF family protein