PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62027653-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27380 Da PI: 9.2833 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.3 | 1.5e-31 | 27 | 76 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ AUR62027653-RA 27 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 76 79***********************************************8 PP | |||||||
2 | K-box | 110.7 | 1.5e-36 | 98 | 191 | 8 | 100 |
K-box 8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ea+a+++qqe+akL+ +i++ +++Rh++Ge+L+sLs+keL++Le++Lek++++iRskKnell+++ie +qk+e el+++n+ Lr+++ e AUR62027653-RA 98 GsVAEANAQYYQQEAAKLRGQIKTATENNRHMMGEGLSSLSMKELKNLETKLEKGINRIRSKKNELLFAEIEFMQKREIELHNNNQFLRARISE 191 3499*************************************************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MEFPTQVMEE GSPSSQRKMG RGKIEIKRIE NTTNRQVTFC KRRNGLLKKA YELSVLCDAE 60 VALIVFSSRG RLYEYANHSV KGTIDRYKKA CSDQTGAGSV AEANAQYYQQ EAAKLRGQIK 120 TATENNRHMM GEGLSSLSMK ELKNLETKLE KGINRIRSKK NELLFAEIEF MQKREIELHN 180 NNQFLRARIS ENERAQQSMS LMPGGSDYDL VPSQSFDSRN YFQIELAGAE SDQVNSLMNG 240 I* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-95 | MIKC_MADS family protein |