PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62027225-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 210aa MW: 24529 Da PI: 6.6617 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.1 | 3.4e-18 | 5 | 81 | 17 | 99 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++p+kf +e+++k + +tl+ +sg W+v l ++++ + l++GW++Fvk++ L+egDf+vF+++++s f +v +f+k AUR62027225-RA 5 RIPRKFKDEYKEK--LLQRVTLRGPSGDCWTVAL--AQRGEDIELRNGWRDFVKDHSLEEGDFLVFQHVENSLF--NVLMFDK 81 59****9999755..6779***************..99999999***********************9998888..8888887 PP | |||||||
2 | B3 | 44.9 | 2e-14 | 115 | 186 | 16 | 91 |
EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS B3 16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 ++p++fa+++ ++ s++++l+ ++ W+v l +++ +++l kGW +Fv +n+L++ D +v++l ++ ++++ AUR62027225-RA 115 STIPREFADNClPMV---SQEIRLRV-GSKIWRVSL--NRRNVQCTLNKGWAHFVLDNNLETEDYCVLELADTgTSRQ 186 58******8886444...56899887.78*******..999999*************************886544444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MFPQRIPRKF KDEYKEKLLQ RVTLRGPSGD CWTVALAQRG EDIELRNGWR DFVKDHSLEE 60 GDFLVFQHVE NSLFNVLMFD KTGCEREDSH FVIQDRDIRA ENCCYMRDNK TDRPSTIPRE 120 FADNCLPMVS QEIRLRVGSK IWRVSLNRRN VQCTLNKGWA HFVLDNNLET EDYCVLELAD 180 TGTSRQPLTL DVHIYRAVEK IVPLKVILP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 7e-18 | B3 family protein |