PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027221-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 338aa    MW: 39495.9 Da    PI: 10.6275
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027221-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.16.6e-1846136598
                     -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       ps v k+ +l +pk+fa+++ ++k + s t  ++   +++W v +  +    ++ ++kGWk+F+  n+Lk+gD+++F+l+++++f   v+++r
  AUR62027221-RA  46 IQPSFVVKNFNLGIPKEFANRYlDKKRPFSLTFNVQIDASKTWPVLV--DADYTHVKFRKGWKDFALKNKLKVGDICIFELIRKHKF--QVHIIR 136
                     5678899***************766666777777777888*******..*********************************98888..888887 PP

2B350.63.5e-16224321198
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+ ++ ps v  +  + +pk+f +++    ++k+  s    l++ sg++W v++    +  +  l++GWk+F+ +n+L++ D+++F+l++++ef 
  AUR62027221-RA 224 FVIKMQPSFVEYNFSVGVPKTFRKRYftylDKKQYFSHRFNLRTDSGKTWPVTM--FASNTHAKLKTGWKSFALDNKLNVDDTCIFELINQQEF- 315
                     677888999999999*************99777789999***************..66666788************************987777. PP

                     .EEEEE- CS
              B3  92 lvvkvfr 98 
                      +v+++r
  AUR62027221-RA 316 -KVSILR 321
                     .888887 PP

Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MLVKAMRTNG GAKLIIARNT SLTSEEDKKV RAYAYQRKQP LFVIRIQPSF VVKNFNLGIP  60
KEFANRYLDK KRPFSLTFNV QIDASKTWPV LVDADYTHVK FRKGWKDFAL KNKLKVGDIC  120
IFELIRKHKF QVHIIRVSDE KNAENLVFKT EEEIHYPLIT KACRESPPKK RRTNDHTKPC  180
SSVKGMQTSM DNKLIIAHKR NWKLTPEEYK RVRAYAHQCK HPVFVIKMQP SFVEYNFSVG  240
VPKTFRKRYF TYLDKKQYFS HRFNLRTDSG KTWPVTMFAS NTHAKLKTGW KSFALDNKLN  300
VDDTCIFELI NQQEFKVSIL RVANAKGNHE NPVKSEV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-15B3 family protein