PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026741-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 284aa    MW: 32508.3 Da    PI: 7.4666
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026741-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.88.7e-53131431128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+ +yLkkkv+ + ++l +vi+evd++++ePwdL+   ++ +  ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++
  AUR62026741-RA  13 VPPGFRFHPTDEELLYYYLKKKVSYEAIDL-DVIREVDLNRLEPWDLKDrcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 106
                     69****************************.9***************943444442456************************************ PP

             NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +   + + +g++ktLvfy+grap+g+ktdW+mheyrl
  AUR62026741-RA 107 YLGnNAKRIGMRKTLVFYTGRAPHGHKTDWIMHEYRL 143
                     *9756677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MMPANGGNGQ ISVPPGFRFH PTDEELLYYY LKKKVSYEAI DLDVIREVDL NRLEPWDLKD  60
RCRIGSGPQN EWYFFSHKDK KYPTGTRTNR ATAAGFWKAT GRDKAIYLGN NAKRIGMRKT  120
LVFYTGRAPH GHKTDWIMHE YRLNDEDPQL QQEDGWVVCR VFKKKNHGRG LHSELQHEDD  180
YDNPNPTNNH PSSSHMIKPS TNPTTSTTLF PPRQHGYNVQ PLMFPNNYYN PDYTFDGAMH  240
LPQLASSDTL SATGGSTLFT TMDNILRLSE DLEGESLHLS VWK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.12e-83NAC family protein