PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62026360-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 400aa MW: 44416.9 Da PI: 6.9242

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62026360-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	39.8	1e-12	25	51	1	27
G2-like 1 kprlrWtpeLHerFveaveqLGGsekA 27 kprlrWt eLHerFv+av+qLGG++ + AUR62026360-RA 25 KPRLRWTVELHERFVDAVTQLGGPDST 51 79*********************9965 PP
2	Myb_DNA-binding	69.4	6.1e-22	27	96	1	48
TSSS-HHHHHHHHHHHHHTTTT.....................-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....................tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ AUR62026360-RA 27 RLRWTVELHERFVDAVTQLGGPdstfllpsfilmeilrfwckaTPKTIMRVMGvKGLTLYHLKSHLQKFR 96 89******************************************************************97 PP
3	G2-like	50.3	5.2e-16	68	97	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 kAtPkti+++m+vkgLtl+h+kSHLQk+Rl AUR62026360-RA 68 KATPKTIMRVMGVKGLTLYHLKSHLQKFRL 97 8****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MNSNERTSSM CVQNDSGLVL TTDPKPRLRW TVELHERFVD AVTQLGGPDS TFLLPSFILM 60 EILRFWCKAT PKTIMRVMGV KGLTLYHLKS HLQKFRLGKQ PHKDFNDHHS VKQDATSLEL 120 QRNTASSSGL MGRTMNDSNV HISDAIRMQL EVQRRLQEQL EVQRHLQLRI EAQGKYMQNI 180 LEKACQTLAG ETNMAASASY NNKGNNNILG NNSPTMAGDH LEGPMKEFGP MNFPSLQDLN 240 IYGGEQALDL HSSLDRSSSL ENFMQVPSDS LCLGNKKRPN PYNNGNNNNN GKSPLIWSDD 300 HLRLQELGPP TAANCLGNPQ DHEDPFKGTD IQIAPPSLDH HRSGAEHQID SISEIYESKP 360 LLTSDIVVGG DKKFESSPKL ERLSPASQGT PLGRNSPYG*

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MNSNERTSSM CVQNDSGLVL TTDPKPRLRW TVELHERFVD AVTQLGGPDS TFLLPSFILM  60
EILRFWCKAT PKTIMRVMGV KGLTLYHLKS HLQKFRLGKQ PHKDFNDHHS VKQDATSLEL  120
QRNTASSSGL MGRTMNDSNV HISDAIRMQL EVQRRLQEQL EVQRHLQLRI EAQGKYMQNI  180
LEKACQTLAG ETNMAASASY NNKGNNNILG NNSPTMAGDH LEGPMKEFGP MNFPSLQDLN  240
IYGGEQALDL HSSLDRSSSL ENFMQVPSDS LCLGNKKRPN PYNNGNNNNN GKSPLIWSDD  300
HLRLQELGPP TAANCLGNPQ DHEDPFKGTD IQIAPPSLDH HRSGAEHQID SISEIYESKP  360
LLTSDIVVGG DKKFESSPKL ERLSPASQGT PLGRNSPYG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	2e-70	G2-like family protein