PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62025986-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 446aa MW: 51056.3 Da PI: 6.9921

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62025986-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.5	3.4e-16	48	136	2	88
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 Yn+YA + GF ++k++ +++ +++++ +r +vCs g+++e+k+ ++++ ++ + rtgCka+++ +k +g ++v + HnH+ AUR62025986-RA 48 LYNSYAFKHGFGICKDRLNRRdDKDRTPRQRFLVCSFAGFKQEKKHGEQSKVYQKRNFRTGCKAHIQFDIDKvSGLYVVVNHTMVHNHS 136 7*************99888456666677778**********999999**************99*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
FVDDANDYDI NDEGEVEGIV NLNEGFTEAT ESELFDRKVK SDEEAYDLYN SYAFKHGFGI 60 CKDRLNRRDD KDRTPRQRFL VCSFAGFKQE KKHGEQSKVY QKRNFRTGCK AHIQFDIDKV 120 SGLYVVVNHT MVHNHSRVAV SKRHLIRSHR KVTNEQVVMM SSLTESSIPV ADAVRVLKHQ 180 ASGEANLSFL CRDAYGALSQ HNKMMFDGCD AKRLLSYFKE RKSSEYDFFY DFDVDEKGHL 240 QSFFFRDNRM KVDYDAFDRA QNDLSARAVI EEAIEECTAR INLLMGEDKD VPPELSKTNE 300 QDVTPEKGDG SLLEPAVIFE QLAEEHGGLE KEHGGFEREH GGIVKEHTVQ VDVKDPIKKR 360 KKGQKNTRWK STQEKVSNKL KGQKIKSWRK KSAKGVSKMK HKAQTTIKDF LPVPDGNVLA 420 HSNEFGGSLE FFEPDDYFGV NIREL*

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

FVDDANDYDI NDEGEVEGIV NLNEGFTEAT ESELFDRKVK SDEEAYDLYN SYAFKHGFGI  60
CKDRLNRRDD KDRTPRQRFL VCSFAGFKQE KKHGEQSKVY QKRNFRTGCK AHIQFDIDKV  120
SGLYVVVNHT MVHNHSRVAV SKRHLIRSHR KVTNEQVVMM SSLTESSIPV ADAVRVLKHQ  180
ASGEANLSFL CRDAYGALSQ HNKMMFDGCD AKRLLSYFKE RKSSEYDFFY DFDVDEKGHL  240
QSFFFRDNRM KVDYDAFDRA QNDLSARAVI EEAIEECTAR INLLMGEDKD VPPELSKTNE  300
QDVTPEKGDG SLLEPAVIFE QLAEEHGGLE KEHGGFEREH GGIVKEHTVQ VDVKDPIKKR  360
KKGQKNTRWK STQEKVSNKL KGQKIKSWRK KSAKGVSKMK HKAQTTIKDF LPVPDGNVLA  420
HSNEFGGSLE FFEPDDYFGV NIREL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	358	362	KKRKK
2	358	386	KKRKKGQKNTRWKSTQEKVSNKLKGQKIK
3	358	394	KKRKKGQKNTRWKSTQEKVSNKLKGQKIKSWRKKSAK
4	359	387	KKRKKGQKNTRWKSTQEKVSNKLKGQKIK
5	359	395	KKRKKGQKNTRWKSTQEKVSNKLKGQKIKSWRKKSAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-08	FAR1 family protein