PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62025689-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 456aa MW: 50412.1 Da PI: 5.0293

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62025689-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.6	5.7e-33	238	292	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHerFveav++L G+ekAtPk +l+lm+v+g+t++hvkSHLQkYRl AUR62025689-RA 238 KPRMRWTPELHERFVEAVKKLDGPEKATPKGVLKLMNVEGITIYHVKSHLQKYRL 292 79****************************************************8 PP
2	Myb_DNA-binding	55	1.8e-17	240	291	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++v+avk+l g+ t+k + + m+ +g t +++ks++qky+ AUR62025689-RA 240 RMRWTPELHERFVEAVKKLDGPekaTPKGVLKLMNvEGITIYHVKSHLQKYR 291 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MNHPSRTCLT ASESSKGTTA FCQALPPLDF SSVETYQGLV SSESSYPFLK QSGKLRLPSG 60 PSDIFSSSCD NHLKSAPSRS SMFCTNLYLS SSTSSEAQRQ LGNLPFLPSP SAPRSTKTQL 120 VLNEDTDSQC EQKHSEDTYR DFFNYSGSFS DGDFDDVTCG SDSLAFSERL ELQLLSDELQ 180 LAITDNGENP GIDELYEASP VALRPVVPST VQNNAQPVSP SLSVISCNKT PEAGASHKPR 240 MRWTPELHER FVEAVKKLDG PEKATPKGVL KLMNVEGITI YHVKSHLQKY RLAKYIPERK 300 EVEKKTSSSE EKKSDSSTKE SDASKKGSIN EALRMQIEVQ KQLHEQLEVQ RALQVRIEEH 360 ARYLQKILEE QQKAQTALVS SQSLSSVTSE EPEMEPCPES LPKPAESKTD VSFTLPSKHT 420 NEESEHEPCQ KKPRLEDDSK PEPVSDVPPV VDISL*

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MNHPSRTCLT ASESSKGTTA FCQALPPLDF SSVETYQGLV SSESSYPFLK QSGKLRLPSG  60
PSDIFSSSCD NHLKSAPSRS SMFCTNLYLS SSTSSEAQRQ LGNLPFLPSP SAPRSTKTQL  120
VLNEDTDSQC EQKHSEDTYR DFFNYSGSFS DGDFDDVTCG SDSLAFSERL ELQLLSDELQ  180
LAITDNGENP GIDELYEASP VALRPVVPST VQNNAQPVSP SLSVISCNKT PEAGASHKPR  240
MRWTPELHER FVEAVKKLDG PEKATPKGVL KLMNVEGITI YHVKSHLQKY RLAKYIPERK  300
EVEKKTSSSE EKKSDSSTKE SDASKKGSIN EALRMQIEVQ KQLHEQLEVQ RALQVRIEEH  360
ARYLQKILEE QQKAQTALVS SQSLSSVTSE EPEMEPCPES LPKPAESKTD VSFTLPSKHT  420
NEESEHEPCQ KKPRLEDDSK PEPVSDVPPV VDISL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	4e-79	G2-like family protein