PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024992-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 787aa    MW: 86353.4 Da    PI: 5.3618
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024992-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.81.6e-072954226
                    -S---SGGGGTS.--TTTTT-SS-SS CS
         zf-CCCH  2 ktelCrffartG.tCkyGdrCkFaHg 26
                    kt+lC++f+ +   C++G+ C+FaH 
  AUR62024992-RA 29 KTSLCSYFRSNSgSCSHGEECRFAHN 54
                    89****9975556************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 787 aa     Download sequence    
MRKREEEDVE SESDDLKKPK PASLHPLHKT SLCSYFRSNS GSCSHGEECR FAHNEEELRP  60
RPDGSWDPTS LRVKRKESEE KRDAEDDEGD VEEERSAMMT EVLGDSGDPQ LSKCLIHLPR  120
KWTSDQLKTY LDEQGVVFKL AKKKKGMSVG FLTFEAAEQV KSATELLGGK SIGKEKLKIG  180
DVIPRSYDEK IKSAQKRYQS GMPGVADETE ATLASNGTED GEGNSSTSRV KSVRDAVTPL  240
AHLSYAEQLE QKKNSLTQML KKLTRNARKA CPKDLQLPEW VVKSREIGGL PCKLEGIIES  300
PLINGYRNKC EFSVGLSVQG KPTVGFMLGN FREGVTAVEE PTNCLNVSKI ACNYASVFQE  360
FLRDSALPIW NRFNNSGFWR QLTVREGRNP QKNVELEIEN HEANITEVML IVQVSTEGCD  420
DDLVNSELEK LTQAFVNGAA STSPPLPLTV LALQDHKGIS NVAPADAPLR PLPIHTAQSG  480
SETEVIMATN ESRIHDYIGN LRFSISPTAF FQVNTLAAEK LYSLAGDWAG LGPDTLLFDV  540
CCGTGTIGLT LANRVGMVVG IEMNASAVSD AQRNAEINAI TNCKFICAKA EDVMGSLLRE  600
YLDDTSNPLD GDEKENGAAE SQSVSLNEAD PEDCSNEVNV DTNHACGSDK GEQDLQSNLK  660
DSNTKDGSAL KQHFKNVVAI VDPPRSGLHP VVLKALRTHP CLKRLVYISC NPETLVANAI  720
ELCTPSSEIA EKGRKGQGWR NMSNAGLARH RLKSMPKSEP FQPVKAMAVD LFPHTPHCEL  780
VMLLER*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28450.10.0C3H family protein