PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024897-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HB-other
Protein Properties Length: 322aa    MW: 36339.6 Da    PI: 4.7329
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024897-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox35.91.3e-11244294353
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                      R +++k q+e+Le++++++++p+ +++  +A+ ++L+ r++  WF  +Ra
  AUR62024897-RA 244 ARKRLKKVQVETLENVYRRTKHPTNTMISSIAHVISLPRRRILKWFEDKRA 294
                     58999*********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MAADCCGLNC SGWEVFGAVV ISGCRYNCGL VNWRWLVVFG GCICGVREAM GVMWQIVDCG  60
RGMWLVRGEA MGEKWIELLT SRKKEDSNKD DDIEEDGFEA LFKQLEEDLK QDKEFLDDGE  120
DEISEEELAM LERELEEALA EDENMLALLS ATTNDAPKGE SWQLRRLAQV LKVGRRKTSI  180
KNLAAELCLD RAVVLQLLRE PPPNLLMMSA SLPDKPKPVV TIPDYEDTPA VETPIHVLQG  240
SWSARKRLKK VQVETLENVY RRTKHPTNTM ISSIAHVISL PRRRILKWFE DKRADEGVPA  300
EPASAQQQPY RRSSTESVFT Q*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1244252ARKRLKKVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.11e-54HB-other family protein