PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024721-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 265aa    MW: 29545.4 Da    PI: 5.6614
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024721-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.7e-19117167255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+++AeIrd + ng   r++lg+f+ ae Aa a+++a+ +++g
  AUR62024721-RA 117 SYRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDNAEAAALAYDQAAFAMRG 167
                     69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDNSFYYSSF SSHQTQNNYH HHPQSTPSES ESSGSVGSSE SFPWDEFWST YNSVTLPQLP  60
FNINDSDEIV LFNMLSEQGP QQGNRAETNP ASPASANSAT SSFSQGDVGP TEVEKKSYRG  120
VRRRPWGKYA AEIRDSTRNG VRVWLGTFDN AEAAALAYDQ AAFAMRGPMA VLNFPVEIVR  180
ESLKEMKREN GEFDEDNQDC STSPVIALKR KHLMNRKSMG NNSRKRERKV KNQTNTISSN  240
HGSTNMVVFE DLGADYLEQL LSCS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1209229KRKHLMNRKSMGNNSRKRERK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-41ERF family protein