PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024599-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 438aa MW: 49047.7 Da PI: 9.6234

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024599-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24	9.2e-08	129	171	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE + l ++++++ + + ++a +++ +Rt +++k+r+++ AUR62024599-RA 129 KWTKEETDTLFELCERFDLR-FVLVADRFPSHRTVEELKDRYYS 171 8*****************.*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MDAKDILGIP KNALPLSQEK KSKPPKEPHR KPDGISREVY MLTGGVPPLM PAIDVAQLKK 60 RPPTDEKVTW QWLSFTNSAR KDNLELYHWV RVVNGVPPTG DYPFAKYNKS VDVIKYTDEE 120 YENYLTDPKW TKEETDTLFE LCERFDLRFV LVADRFPSHR TVEELKDRYY SVTRALLIAR 180 APSPADVSGH PLIKEPYNAK QETERKRALS MVLSQTKHQE RKDAEVLAEA KRIQEARLLA 240 KEAEESELPA TSDVAADADR TAHPGSVSPI SAAPAAADNA ATLASLRSMR VYLRTYALEQ 300 MVQAVSSSAG LRTIKRVEQT LQDLGVNLKP KVPTKSVCAE HLELRKEILT LLNLQKQFQY 360 KEAEGSSYRE GSYIDTPETP KRSQRAGDQD RPFVPEPLSF GGDRVGKRDQ KKKGPGRSSD 420 APSSPATKRA RKLKADG*

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MDAKDILGIP KNALPLSQEK KSKPPKEPHR KPDGISREVY MLTGGVPPLM PAIDVAQLKK  60
RPPTDEKVTW QWLSFTNSAR KDNLELYHWV RVVNGVPPTG DYPFAKYNKS VDVIKYTDEE  120
YENYLTDPKW TKEETDTLFE LCERFDLRFV LVADRFPSHR TVEELKDRYY SVTRALLIAR  180
APSPADVSGH PLIKEPYNAK QETERKRALS MVLSQTKHQE RKDAEVLAEA KRIQEARLLA  240
KEAEESELPA TSDVAADADR TAHPGSVSPI SAAPAAADNA ATLASLRSMR VYLRTYALEQ  300
MVQAVSSSAG LRTIKRVEQT LQDLGVNLKP KVPTKSVCAE HLELRKEILT LLNLQKQFQY  360
KEAEGSSYRE GSYIDTPETP KRSQRAGDQD RPFVPEPLSF GGDRVGKRDQ KKKGPGRSSD  420
APSSPATKRA RKLKADG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	378	383	ETPKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein