PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024449-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 464aa MW: 51020.7 Da PI: 7.7982

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024449-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.8	1.3e-10	325	389	39	99
EETTS-EEEEEE.......EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 39 edesgrsWevkliy.....rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + s ++W++++ + + + g+ ++l+ GW eFvk+n L++gD + F+++g++ f vv++ r AUR62024449-RA 325 LHGSVKEWKITMVHeeddeNVNNGWkTILEVGWPEFVKDNCLNSGDNLYFTYSGHNAF--VVQISRG 389 445669****99888764444447*************************99999..9999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MVASKCVGVR ECSDSLFLCL KITLNKYRCV YDLILFLDFY WSDLPVLVGW ISTVLAVVGW 60 ISTGVFTVTC GVSSNLGRRS EMDELLAAED ELGGCDEIGA LIEIGPNTDK LDNISLTPMG 120 ETSSPIGPIQ TIKTPETVST NKEAFAVDDD TVETVRAAVK KLREEVRASR AKLMENTALP 180 KPATTPSSTP THQSTPQAFT PRSTHSHQST PQAITPRSTH QASPHAVTPN TGRPKGSWNK 240 SRAELDYNTT KLNTRKDCDN QVKHKKGHNP YAEFWNVSTE VQASMASLTA SFTVEYATEH 300 QRSVPIPGVF REVLDNGSLG VRILLHGSVK EWKITMVHEE DDENVNNGWK TILEVGWPEF 360 VKDNCLNSGD NLYFTYSGHN AFVVQISRGS VSKGKGKGKD VGSSSKRRTG RIPANLRSSP 420 KMIETNEWID DLAQGFPSPN FRFIFTASYL RKGAIVSILI IRP*

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MVASKCVGVR ECSDSLFLCL KITLNKYRCV YDLILFLDFY WSDLPVLVGW ISTVLAVVGW  60
ISTGVFTVTC GVSSNLGRRS EMDELLAAED ELGGCDEIGA LIEIGPNTDK LDNISLTPMG  120
ETSSPIGPIQ TIKTPETVST NKEAFAVDDD TVETVRAAVK KLREEVRASR AKLMENTALP  180
KPATTPSSTP THQSTPQAFT PRSTHSHQST PQAITPRSTH QASPHAVTPN TGRPKGSWNK  240
SRAELDYNTT KLNTRKDCDN QVKHKKGHNP YAEFWNVSTE VQASMASLTA SFTVEYATEH  300
QRSVPIPGVF REVLDNGSLG VRILLHGSVK EWKITMVHEE DDENVNNGWK TILEVGWPEF  360
VKDNCLNSGD NLYFTYSGHN AFVVQISRGS VSKGKGKGKD VGSSSKRRTG RIPANLRSSP  420
KMIETNEWID DLAQGFPSPN FRFIFTASYL RKGAIVSILI IRP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34400.1	3e-06	B3 family protein