PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62024413-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NF-YA | ||||||||
Protein Properties | Length: 146aa MW: 16603.5 Da PI: 10.2685 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.9 | 3e-32 | 71 | 126 | 2 | 58 |
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 ep+YVNaKQy++I++RRq+Rak+e e++ k+rkpylheSRh hAlrR+RgsgGrF AUR62024413-RA 71 EPIYVNAKQYHGIMRRRQSRAKAELENRA-VKTRKPYLHESRHLHALRRQRGSGGRF 126 8****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MARLIMSLVG KYGEQQKQEQ HGVFPMDHHQ IIHDYNMPIS HQTGLPQHNT GYYEGIHSNG 60 VPLPGEAANY EPIYVNAKQY HGIMRRRQSR AKAELENRAV KTRKPYLHES RHLHALRRQR 120 GSGGRFLNTK QSDGPTSSNS SNQYS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.1 | 3e-36 | NF-YA family protein |