PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024404-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 833aa    MW: 92253.2 Da    PI: 5.5357
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024404-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.16.5e-11770822346
                      SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 
                      rWT+eE+e l+++v+ +  g      Wk+I ++      kgRt+ ++k++w++
   AUR62024404-RA 770 RWTAEEEETLKKGVEIYDQGngrtiLWKSILEYGDsvfrKGRTAVDLKDKWRN 822
                      9*****************99*************99*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 833 aa     Download sequence    
MEEEDSASTL AWSWVIEALA KSQLVDATLL YELVSKTPPL LGESGRKARE ATALRCLEGL  60
FSPSNVSSKN HVASDWSKFG FDPAESCEAA IQRLLRETSG FKGASDELNC NTDSFLKHKK  120
ASLPKSTLEL LKDMIVEDTH PLAASLKEVS GLAVGDQCVL DIPFDGGDPT SPPLRSDEDD  180
HVEKTMLAEE NGCSPISGID NQLRQAYLAN GKTSSRGGVS SNHTDNHMQE LEAASHDMDN  240
LCPPGKKLKL DKEYGMQSKH QHSAPVDSNQ MCNNAEDGQY HEVIRVNAIY DSKSYGKDDE  300
QSKTYAENHD QQQISPNNGN AEAVQYHEVI KVNAQHDGKS YGIDDEQPKT SVENHDQQQI  360
SHNNDDHFRK EIDLAMKNHN FPSSQCVLTG DSLEMTETQT NLCMKCNKDG QLLSCSASSC  420
PLLFHESCLG CSASFDDLGN FYCPFCAYSR AMSEYVRAKE KVSLARKELS LFIGGRTRDF  480
PERDGDSSSG DDVNLGKHKN VDKTAEVKKA ATFVNQAAKS HQTSLKGKQL ELTHSSAYMN  540
VNRFVMATQQ HISFQDRQGA EIIIQLSRNP SQIWNKDQDD HRCDGVKLSG DNNELKLQGK  600
LTRCKITEFR EDASSESISD SDGPQQDKGN DGTCSLACRR PLRNQLDDCF NYSYLVMSGY  660
AVSIVSSVYL CFFDSELRSS SGTCLFIIAL IGSSVFFLLV IFFKKSNVAL KDFCLIARVA  720
YMLASLDPTD DEILLSHWVV GSVLFLKQLP AIAVSLDVVG SPVGRRKKIR WTAEEEETLK  780
KGVEIYDQGN GRTILWKSIL EYGDSVFRKG RTAVDLKDKW RNITRGTSPK VN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49850.13e-08MYB_related family protein