PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024403-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 268aa    MW: 30926.5 Da    PI: 6.3804
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024403-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97e-203079255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  AUR62024403-RA 30 TYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAALAYDEAARRLYG 79
                    69****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MDNLKKSSLS KPWKKGPARG KGGPQNATCT YRGVRQRTWG KWVAEIREPK KRTRLWLGSF  60
ATAEEAALAY DEAARRLYGP DAYLNLPHLR CSFNPLNKSQ RFRWFPSKNF ISMFPASSGT  120
TPSLLNVNVQ PSVHVIHQRL QEFKNFRPSL SDHNNKSEPK NVKRDNKEVE IDNDKQKWEK  180
PQIDLHEFLE QMGVLKEGEA AYDNKADANN GENDELNENN MEEMNSEWDE LVEILRGEDY  240
QQPESSSYGD YNMQQELITF PPGIWDF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.17e-64ERF family protein