PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024182-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARR-B

Protein Properties

Length: 617aa MW: 69231.2 Da PI: 5.2218

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024182-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76	5e-24	189	244	1	55
G2-like 1 kprlrWtpeLHerFveaveqLG.GsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+qLG s+k Pk+il+lm+v+ Lt+e+v+SHLQkYRl AUR62024182-RA 189 KARVVWTVDLHQKFVKAVNQLGiDSDKIGPKKILDLMSVPWLTRENVASHLQKYRL 244 68*****************7447899*************************8 PP
2	Myb_DNA-binding	39.1	1.7e-12	191	243	1	48
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+qlG + +k+I m +t++++ s++qky+ AUR62024182-RA 191 RVVWTVDLHQKFVKAVNQLGIDsdkiGPKKILDLMSvPWLTRENVASHLQKYR 243 678*************************************************7 PP
3	Response_reg	79.3	1.3e-26	21	129	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++eal+ll++++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G AUR62024182-RA 21 VLVVDDDPTWLKILEKMLKKCCY-EVTTCGLAREALKLLRDRKdgFDIVISDVNMPDMDGFRLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 113 89*******************.***********888889******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el + AUR62024182-RA 114 ACDYLLKPIRMKELKN 129 **********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MGMEHGFSTP RTETFPAGLR VLVVDDDPTW LKILEKMLKK CCYEVTTCGL AREALKLLRD 60 RKDGFDIVIS DVNMPDMDGF RLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK 120 PIRMKELKNI WQHVVRKRMH DVRDIECFED RSGTDHSYDG LYGGEQNFLK KRKDVDIEKD 180 SSDPSTTKKA RVVWTVDLHQ KFVKAVNQLG IDSDKIGPKK ILDLMSVPWL TRENVASHLQ 240 KYRLYLSRLR KEDKENSFGG MKNPDHSAKE SSGSFISIQN SNFGKHDITS KHVYQGNQLP 300 VQTADSKPPD NDPESSKLLP LTEHIIPFSS EDCDSHTRNS QLGLNHTYES LDMSVKQASF 360 DSPVSGQYPW SGEVPDHLQF EPELKAHPNL ESCTFNQPTV PILHQHISPE ILEPAPHISP 420 GTSISKSNNI GLADIKPLNA NECGNDTGKL SPMESPLGSY SVPNSDALGC VFDMKGQNFS 480 QGVSFKEQPV FERPLQSFPI QPASHLVDAQ GLDPCFDVTL EMKKQISCQN RSIIDPSSVI 540 SSESELRNQV FGSELASGLL SEDMMFRWLQ YGDVTSKDFG LDYIGFTGCN FPDFDSETPL 600 PPYMPKLDHE YLLDWA*

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MGMEHGFSTP RTETFPAGLR VLVVDDDPTW LKILEKMLKK CCYEVTTCGL AREALKLLRD  60
RKDGFDIVIS DVNMPDMDGF RLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK  120
PIRMKELKNI WQHVVRKRMH DVRDIECFED RSGTDHSYDG LYGGEQNFLK KRKDVDIEKD  180
SSDPSTTKKA RVVWTVDLHQ KFVKAVNQLG IDSDKIGPKK ILDLMSVPWL TRENVASHLQ  240
KYRLYLSRLR KEDKENSFGG MKNPDHSAKE SSGSFISIQN SNFGKHDITS KHVYQGNQLP  300
VQTADSKPPD NDPESSKLLP LTEHIIPFSS EDCDSHTRNS QLGLNHTYES LDMSVKQASF  360
DSPVSGQYPW SGEVPDHLQF EPELKAHPNL ESCTFNQPTV PILHQHISPE ILEPAPHISP  420
GTSISKSNNI GLADIKPLNA NECGNDTGKL SPMESPLGSY SVPNSDALGC VFDMKGQNFS  480
QGVSFKEQPV FERPLQSFPI QPASHLVDAQ GLDPCFDVTL EMKKQISCQN RSIIDPSSVI  540
SSESELRNQV FGSELASGLL SEDMMFRWLQ YGDVTSKDFG LDYIGFTGCN FPDFDSETPL  600
PPYMPKLDHE YLLDWA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-124	ARR-B family protein