PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62024115-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NF-YC | ||||||||
Protein Properties | Length: 129aa MW: 14765.1 Da PI: 10.1645 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 48.3 | 2.2e-15 | 13 | 95 | 17 | 98 |
NF-YC 17 knhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98 + ++P r+kki+k+d+d+++i++ea l+s a elf+ lt +s a e+kr+ +k + av+r + + dfl+d p AUR62024115-RA 13 LKPSFPTGRVKKIVKFDKDITRITSEALFLVSGATELFLHFLTEKSAEIAVEKKRKNIKVDYLRLAVKRHQpTRDFLLDSLPM 95 45689**************************************************************9976489*****9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MADEEEIHSS ETLKPSFPTG RVKKIVKFDK DITRITSEAL FLVSGATELF LHFLTEKSAE 60 IAVEKKRKNI KVDYLRLAVK RHQPTRDFLL DSLPMPSSQP LDEPPADRTV KRKSVLPPNT 120 RRIDSFFW* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 3e-42 | NF-YC family protein |