PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62024057-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | FAR1 | ||||||||
Protein Properties | Length: 185aa MW: 20680.8 Da PI: 9.6657 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67 | 4.7e-21 | 65 | 161 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++Y++ GF vr +++k+ k++++++ + ++C+k+g++++ +k ++ ++r+ + +r+gC+a++ +k+++dgkw+v+ +++ H+H+ AUR62024057-RA 65 DFYKQYGRFGGFVVRLDTEKRIKDSDKVYLKYLYCNKQGFAKDGGTKarvakkdEKPKSRKITINRVGCNAMIGLKEHSDGKWMVYVFHESHSHN 159 6*****************************************99998999998777788888999****************************** PP FAR1 89 la 90 la AUR62024057-RA 160 LA 161 97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MEEESEEGSC SNTSTTTNVA ENLLSLKGPS VCYTPRGTKE FIPCCPPELK PKLGMTFDSL 60 LKGVDFYKQY GRFGGFVVRL DTEKRIKDSD KVYLKYLYCN KQGFAKDGGT KARVAKKDEK 120 PKSRKITINR VGCNAMIGLK EHSDGKWMVY VFHESHSHNL ASPNTMNFLA NVGNLKLGQK 180 KIHF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 3e-16 | FAR1 family protein |