PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023866-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 2041aa MW: 231973 Da PI: 6.0892

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023866-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	68.2	1.2e-21	262	360	5	98
-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS B3 5 ltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 ltps v+k+++l +pk fae++ + + +s+ l +ed++g+ W+++++y+++ + y+l++GW++Fv++++L +gD+v F++ g ++ ++ AUR62023866-RA 262 LTPSGVSKLKCLPIPKVFAEKYfpkllS--SIKSILLNFEDLTGKLWTFQYSYWNTYQCYILAEGWSRFVEEKQLSVGDTVFFYRGvGGeDRYKF 354 799*******************9554..45899***********************************************54444466777 PP EEEEE- CS B3 93 vvkvfr 98 ++++ r AUR62023866-RA 355 FIHWSR 360 777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 2041 aa Download sequence
MLTKSLINPV SASASSSREY YCESGTRFLR RDSLISHQLF SDAVSIKEDL TAIAMLSPVS 60 KQPKLQLAEQ DAKTSVSNNP QELAVADPFE QSVITSVSNK PRELNVADPF EQSSMTSVSN 120 KPRELNVADP FEHSAMTFVS NKPRELNVAD PFEQSSMTSV SSKPQELNVA DPFAHTTMPS 180 VSTRQPQECN VADSVAQIDM HLREALTAGT ELMENLKLSG SENDLAASEL AEQVILSAKR 240 VQKLLPVKKE MMFRKELLPM DLTPSGVSKL KCLPIPKVFA EKYFPKLLSS IKSILLNFED 300 LTGKLWTFQY SYWNTYQCYI LAEGWSRFVE EKQLSVGDTV FFYRGVGGED RYKFFIHWSR 360 RGALAKQFLG NALLFRMLNS PPNASYDEMD ADDVHAPFTP FPFTPSPLTP YPFTPSPLTP 420 YPFTPSPTLS DGLIVDDALA PYFHSLSPNH CSPCEADFDG VIADKALRYC ALFPHNYEFE 480 KETVIQLWMA HGVFVREPME GNADFFFENW LTRGYFLFCQ TNLVTGKAMY KFKRDCCLFP 540 LSILSGNHVV LIEGNSNLND VSVEVSHVSI RCYTQKNSTV FQELKRFKHL RTLMFLRGHD 600 LSFKQVPRDF FLSLKLLQVL DLSQTCLLEL PSSIGNLKCL RYLDLSETLI KRLPAAIDCL 660 ENLLTLKLRG CLNLTSLPKG MNKLVNLRHL ELDVRRQLRS MPPGLGTLTN IQTLSAFLVD 720 LEDECSIRQL QNMNNLSGNF CICRLENVLT KDEAIEACLC YKSKLTKLEL QWSDSQNEDV 780 SGSGEVLSSL VPNTSLEELH ISCFDGFDLP GWICDPAFSK LVRITLFKCE NCLVLPSLGQ 840 LPSLKFLNIL DFHKLKVIDH NFYGWLDFQG VIAFPKLEKL AIENMLSLEE WSGMEKSVFP 900 CLLKLTIKYC PKLCSLNTLS NLSFLKYLEI SHCDMLESWT DGRLPPSVET LIIEDCPMIS 960 VESLKNGGQD WHKVAHIQSL WVDNQEIPSG KSFHATFLYL SSRRTCIVFF FFFKGQQSSF 1020 PSIVILPLLS QLILQWLNER RFTEVSDTED FHIALLVTLF RLYSKWTGPM VMNFAGDDMA 1080 ASVISTLKLI ILRKKGCIVY DVVTGELSSL NKNTKIDFAL ALLQDLLERF KFLVFEEAGQ 1140 VVQFDAEDEL KKLKRKLLKA ETLFDSFQLT PNNTWQHWVG EVTGVCYDAE DLVDDIVLGA 1200 SKTSVIEKMF SFFERRKMAQ QIQELQGRLE DIISGLDMVN RTNQQALQCS LGCYKEIAHT 1260 REQIRVPVRL FGRESDKEKI VSMLLEETLI TVSIVGMGGL GKTTLAQSIQ DDSRIQEKFH 1320 RIVWISVSAE FDMTKITDFI LNRRQEGEYS FHPERIQSSF GDLYLGRSIL FVLDDLREVK 1380 GNDWCSFCHY FLCSSGSKAL LTTSNPNVTS ITNATPYHLQ MMKDEDCQVL IMDRALSFNN 1440 ISERKLVILE DIAGAMAQKC KGLPLAANIL GLLLSSKHDD DDWVTLSEKD ICELSIFKEE 1500 IFPAFRLSNP NLASHLKKCL AYCSLFPRDY DFEKDNLVQL WMAEGFLLPQ GMTNLEQIGC 1560 EYFNELLWRS VFQLSHLGDQ EMPSYKIHEF IHRFAEFVAS DTCFRLAKGE WSCSAPLYKK 1620 VRHLSLLCDC IKLPFLKEIE KCDGLRTFLL LSEHGTQIGQ VPYSFFQKLV RLRVLDLSHT 1680 NIDELPESLG RLKHLRYLDA SQTHILRLPN SASDLHGLQV LKLSGCSELR ELPKQIKNLT 1740 NLIHLDVDMR KLRCMPASIG SLSCLKTLPA FMVGKKEGYR ITELKNLKHL RGTIYLGKLE 1800 YVRDGAEARE AMICDKPFIK RLELEWSRCS RDGSVQMDIL SGLQPHKNLK ELLLINYGGS 1860 RFPVWLTSPS CLLVSIHVQF CKQDDVLPSL GQLLFLKTLN IEGMDRVKCV DNHFCGEGRN 1920 EAFPSLESLK IQDMMCLARW FKLPDNSMPQ LRELTIEDCP NLLSMQSLKH MNSLQTFELN 1980 RCMELMSLPE LPVSIQSLII TDCDMVKQRC QPEEGPDWSS IRAIPYVEID YETVVPQASS 2040 *

Sequence ? help Back to Top

Protein Sequence Length: 2041 aa Download sequence

MLTKSLINPV SASASSSREY YCESGTRFLR RDSLISHQLF SDAVSIKEDL TAIAMLSPVS  60
KQPKLQLAEQ DAKTSVSNNP QELAVADPFE QSVITSVSNK PRELNVADPF EQSSMTSVSN  120
KPRELNVADP FEHSAMTFVS NKPRELNVAD PFEQSSMTSV SSKPQELNVA DPFAHTTMPS  180
VSTRQPQECN VADSVAQIDM HLREALTAGT ELMENLKLSG SENDLAASEL AEQVILSAKR  240
VQKLLPVKKE MMFRKELLPM DLTPSGVSKL KCLPIPKVFA EKYFPKLLSS IKSILLNFED  300
LTGKLWTFQY SYWNTYQCYI LAEGWSRFVE EKQLSVGDTV FFYRGVGGED RYKFFIHWSR  360
RGALAKQFLG NALLFRMLNS PPNASYDEMD ADDVHAPFTP FPFTPSPLTP YPFTPSPLTP  420
YPFTPSPTLS DGLIVDDALA PYFHSLSPNH CSPCEADFDG VIADKALRYC ALFPHNYEFE  480
KETVIQLWMA HGVFVREPME GNADFFFENW LTRGYFLFCQ TNLVTGKAMY KFKRDCCLFP  540
LSILSGNHVV LIEGNSNLND VSVEVSHVSI RCYTQKNSTV FQELKRFKHL RTLMFLRGHD  600
LSFKQVPRDF FLSLKLLQVL DLSQTCLLEL PSSIGNLKCL RYLDLSETLI KRLPAAIDCL  660
ENLLTLKLRG CLNLTSLPKG MNKLVNLRHL ELDVRRQLRS MPPGLGTLTN IQTLSAFLVD  720
LEDECSIRQL QNMNNLSGNF CICRLENVLT KDEAIEACLC YKSKLTKLEL QWSDSQNEDV  780
SGSGEVLSSL VPNTSLEELH ISCFDGFDLP GWICDPAFSK LVRITLFKCE NCLVLPSLGQ  840
LPSLKFLNIL DFHKLKVIDH NFYGWLDFQG VIAFPKLEKL AIENMLSLEE WSGMEKSVFP  900
CLLKLTIKYC PKLCSLNTLS NLSFLKYLEI SHCDMLESWT DGRLPPSVET LIIEDCPMIS  960
VESLKNGGQD WHKVAHIQSL WVDNQEIPSG KSFHATFLYL SSRRTCIVFF FFFKGQQSSF  1020
PSIVILPLLS QLILQWLNER RFTEVSDTED FHIALLVTLF RLYSKWTGPM VMNFAGDDMA  1080
ASVISTLKLI ILRKKGCIVY DVVTGELSSL NKNTKIDFAL ALLQDLLERF KFLVFEEAGQ  1140
VVQFDAEDEL KKLKRKLLKA ETLFDSFQLT PNNTWQHWVG EVTGVCYDAE DLVDDIVLGA  1200
SKTSVIEKMF SFFERRKMAQ QIQELQGRLE DIISGLDMVN RTNQQALQCS LGCYKEIAHT  1260
REQIRVPVRL FGRESDKEKI VSMLLEETLI TVSIVGMGGL GKTTLAQSIQ DDSRIQEKFH  1320
RIVWISVSAE FDMTKITDFI LNRRQEGEYS FHPERIQSSF GDLYLGRSIL FVLDDLREVK  1380
GNDWCSFCHY FLCSSGSKAL LTTSNPNVTS ITNATPYHLQ MMKDEDCQVL IMDRALSFNN  1440
ISERKLVILE DIAGAMAQKC KGLPLAANIL GLLLSSKHDD DDWVTLSEKD ICELSIFKEE  1500
IFPAFRLSNP NLASHLKKCL AYCSLFPRDY DFEKDNLVQL WMAEGFLLPQ GMTNLEQIGC  1560
EYFNELLWRS VFQLSHLGDQ EMPSYKIHEF IHRFAEFVAS DTCFRLAKGE WSCSAPLYKK  1620
VRHLSLLCDC IKLPFLKEIE KCDGLRTFLL LSEHGTQIGQ VPYSFFQKLV RLRVLDLSHT  1680
NIDELPESLG RLKHLRYLDA SQTHILRLPN SASDLHGLQV LKLSGCSELR ELPKQIKNLT  1740
NLIHLDVDMR KLRCMPASIG SLSCLKTLPA FMVGKKEGYR ITELKNLKHL RGTIYLGKLE  1800
YVRDGAEARE AMICDKPFIK RLELEWSRCS RDGSVQMDIL SGLQPHKNLK ELLLINYGGS  1860
RFPVWLTSPS CLLVSIHVQF CKQDDVLPSL GQLLFLKTLN IEGMDRVKCV DNHFCGEGRN  1920
EAFPSLESLK IQDMMCLARW FKLPDNSMPQ LRELTIEDCP NLLSMQSLKH MNSLQTFELN  1980
RCMELMSLPE LPVSIQSLII TDCDMVKQRC QPEEGPDWSS IRAIPYVEID YETVVPQASS  2040
*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1150	1157	LKKLKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	1e-27	B3 family protein