PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023581-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 1030aa    MW: 115814 Da    PI: 6.5283
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023581-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2951.9e-9064910271374
            GRAS    1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93  
                      l++lLl +A+ +++++ + a   + +l   +s +gd+ +R+aayf+ +L arl+ + s  y+ + +++ +    +ee++a++  + vsP+++f
  AUR62023581-RA  649 LIHLLLVAATLIKENNVSSAADNVMELYRYVSVTGDSGKRVAAYFADGLVARLLTQKSAFYNMVMSKPIP----AEEFMAFTHMYRVSPFYQF 737 
                      689****************************************************999999999988887....899999999********** PP

            GRAS   94 shltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfe 177 
                      +h+taNqaIlea+ege      ++H+iDfdis+G+QWp+L+q+L++ +   +   slRiTg+++    s eel  t++rL +f + + ++ fe
  AUR62023581-RA  738 AHFTANQAILEAFEGEeennnWALHVIDFDISHGFQWPSLMQSLSEMAtasNRLVSLRITGLAK----SLEELIDTENRLISFSKGFqNIAFE 826 
                      ***************966554467********************988754455669********....9****************9857**** PP

            GRAS  178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270 
                      f+ l    l   +l +L+ +++E++aVn+v++l +l  + +++    +e++ +v sl+P +vv+ve+e + ns   l   +++l+yy+a+fds
  AUR62023581-RA  827 FHGL----LRGSKLVNLERREKETIAVNMVFHLSSLS-DILKI----SETMTAVHSLNPSIVVLVEREGSQNSCGILPNYVDSLHYYAAMFDS 910 
                      ***8....6666778999***************9997.44444....45******************************************** PP

            GRAS  271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk....vk.sdg......yrve 352 
                      l+  lp es er ++E+  lgrei++++a e++ +  r e le+W+ r+ + GF+ ++ls+ka+ qaklll++    ++ ++g      +r+ 
  AUR62023581-RA  911 LDDCLPLESAERLNIEKNHLGREIKDLIASEEEVKCSRFEILETWKGRMISHGFSGIELSSKATIQAKLLLKMgchyHPhFEGnsggggFRIY 1003
                      ***********************************************************************9754431223333334458887 PP

            GRAS  353 ee..sgslvlgWkdrpLvsvSaWr 374 
                      e+     + lgW+dr L+++SaWr
  AUR62023581-RA 1004 ERdyGRGISLGWQDRFLITASAWR 1027
                      764344555**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1030 aa     Download sequence    
MENSSPISNF NSHSPYELIF QALLMIPISH YFIGFAIFVA VILYNFVEWH LIRDILTGFR  60
GQPITLTFNS ESKLYEGVVS KCRILHGRYL ATPWLASPHI QTTFLNFFGR PPVFNYRRQM  120
FHLSDGGTVA LDWLMSSDGH VWADNCLSVD SSVMGHAVYI DNVIPKDDKT PIVLVIPGLT  180
SDSNSPYLKH LVYNTAKCGW NVVVSNHRGL GGVSVTSDCF YNAGWTDDVR VIIHHLHREY  240
PSAPLFVVGT SIGANVLVKF LGEDGEDIPI AGAVAICSPW DLLIGDRFIG RRLVQKFYDR  300
ALTIGLQGYA QLHQPRYSRL ANWEGIIKSR SIRDFDNHAT CLVGKYETVD TYYRRNSSAN  360
YVDKVAVPLL CISALDDPVC TKEAIPWDEC RLNKNIVLAT TQHGGHLAFF EGITASSLWW  420
VRAVTEFLGI LHSSPYMHRQ KKVQIPSPIP PSEPALVQGP YISVAEDGMV AAVANEPTRT  480
DGFEDSSELI KPTISMVKED RDQQLRELVP NDVPSESQTH EQKSSTCDAP CHSATSHIKR  540
RLEQLTRHSG KSIWLLAYVA IVTSWPLSCV ITEAITMNEE VLSLSLATVG HSDHVERKLK  600
RRRIDDSHSL TNSVEEWEEK IFRLLEERQR MLNIEQRGKN VQEGSGLHLI HLLLVAATLI  660
KENNVSSAAD NVMELYRYVS VTGDSGKRVA AYFADGLVAR LLTQKSAFYN MVMSKPIPAE  720
EFMAFTHMYR VSPFYQFAHF TANQAILEAF EGEEENNNWA LHVIDFDISH GFQWPSLMQS  780
LSEMATASNR LVSLRITGLA KSLEELIDTE NRLISFSKGF QNIAFEFHGL LRGSKLVNLE  840
RREKETIAVN MVFHLSSLSD ILKISETMTA VHSLNPSIVV LVEREGSQNS CGILPNYVDS  900
LHYYAAMFDS LDDCLPLESA ERLNIEKNHL GREIKDLIAS EEEVKCSRFE ILETWKGRMI  960
SHGFSGIELS SKATIQAKLL LKMGCHYHPH FEGNSGGGGF RIYERDYGRG ISLGWQDRFL  1020
ITASAWRCI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1600604KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04890.16e-57GRAS family protein