PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62023427-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 229aa MW: 25551.9 Da PI: 8.6084 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 53.7 | 3.5e-17 | 79 | 133 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++ keq+ +Le++F ++ +++++++ LA++++L rqV vWFqNrRa+ k AUR62023427-RA 79 RKKLRLCKEQILVLEQAFSEHTTLNTKQKVALATEVNLRPRQVEVWFQNRRARTK 133 66777889*********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 115.3 | 3.6e-37 | 79 | 168 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl keq+ +LE+ F+e+++L++++Kv+la+e++l+prqv+vWFqnrRARtk kq+E+d+e+Lk+ +++l+een+rL++ev+eLr +l AUR62023427-RA 79 RKKLRLCKEQILVLEQAFSEHTTLNTKQKVALATEVNLRPRQVEVWFQNRRARTKFKQTESDCEQLKKYCETLTEENKRLQNEVQELR-AL 168 69*************************************************************************************9.44 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MNTLNNTLAI IPRINKGLIS KQPIDIIDLE EEEKTSKVGS PKSTLSCVTG KRFGGDREVI 60 SDEEEGGNRG GSESSGGERK KLRLCKEQIL VLEQAFSEHT TLNTKQKVAL ATEVNLRPRQ 120 VEVWFQNRRA RTKFKQTESD CEQLKKYCET LTEENKRLQN EVQELRALKF SPEHSMMEAN 180 HPPTTLTMCP SCKNVSFSSS SATTKTPAGE TGRSLLGVFH QRTPLTIQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 128 | 136 | RRARTKFKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44910.1 | 5e-54 | HD-ZIP family protein |