PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023232-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 320aa    MW: 35157.9 Da    PI: 6.2871
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023232-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.2e-09233276755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L++l+P+       K++ +++LekA+ Y+k Lq
  AUR62023232-RA 233 IAAKNRRERISERLKILQDLVPNG-----SKVDLVTMLEKAIGYVKFLQ 276
                     5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MLEAGSSLQF PHISPYGFDN FNQKREGDAL ESPSSNSKII MNNNTQVMSP SPPLSSSTSS  60
ANSSNGGSFV IQHPQASNYQ PHEEANSLIN FKAGYESLMH SGGSLLSFQQ EDNTTFSNDH  120
HHYHPMWEAS SSSGMSHDHL KLMKNCTSNL RLLEEVNCLQ TASDGGYQDE ANEWLYAEAI  180
IDPPQESGSQ QTSFNKRPHM EEETMQASKK QCTSTSKKSA KTKSSTSKDP QSIAAKNRRE  240
RISERLKILQ DLVPNGSKVD LVTMLEKAIG YVKFLQLQVK VLATDEFWPV AGGKAPNISQ  300
VREAIDAILS TQRPEGTTS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.11e-49bHLH family protein