PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022945-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 176aa    MW: 19537.1 Da    PI: 6.9307
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022945-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601452.2e-4581071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+CakdC++apyfp+++p+kfa+vhk+FGasnv+k+l++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ql+ +la
  AUR62022945-RA   8 PCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPMHQRADAVSSLVYEANARMRDPVYGCVGAISFLQNQVSQLQMQLA 102
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  AUR62022945-RA 103 VAQAE 107
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MGGNGTSPCA SCKLLRRRCA KDCIFAPYFP SDDPHKFAIV HKVFGASNVS KMLQELPMHQ  60
RADAVSSLVY EANARMRDPV YGCVGAISFL QNQVSQLQMQ LAVAQAEILC IQMQPESNSI  120
ATPVHQNNYE ADDKSFLFHN NLSQPQYINF PSSSDHHVIQ DSLKRESFFG HDMVS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.11e-77LBD family protein