PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022922-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 352aa MW: 39302.7 Da PI: 9.4615

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022922-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.3e-32	85	138	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+ AUR62022922-RA 85 PRLRWTPDLHLCFVHAVERLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 138 8****************************************************7 PP
2	Myb_DNA-binding	51.4	2.4e-16	86	137	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ AUR62022922-RA 86 RLRWTPDLHLCFVHAVERLGGQeraTPKLVLQLMNiKGLSIAHVKSHLQMYR 137 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MIRAGSASTE GSKTSLSNDR IDECEEDDDK VLEEEEVDEN NSNDSNSKVI KINGSSSSTS 60 TVEENEKKGP TSSGSVRPYN RSKMPRLRWT PDLHLCFVHA VERLGGQERA TPKLVLQLMN 120 IKGLSIAHVK SHLQMYRSKK IDESNQAMSN QGLFADGRDN IYNLSQLPML QGYNHQRSPF 180 SLRYGDPSWR GHSTSQMYAP YNIGTSSDRS RNGLNFGSLP ERMVFSSTNS NSQAGFNNLF 240 QGQMSNWRTQ QTLKKAPISQ SNNGSSSCQS TSKPRSNMEL NLAISPIQEV AVERKERSNP 300 LNFLKPSNIN IKQGTTNNNH LKRKAMDLDL SLALAPKDID DPLTKKNTKD KE

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MIRAGSASTE GSKTSLSNDR IDECEEDDDK VLEEEEVDEN NSNDSNSKVI KINGSSSSTS  60
TVEENEKKGP TSSGSVRPYN RSKMPRLRWT PDLHLCFVHA VERLGGQERA TPKLVLQLMN  120
IKGLSIAHVK SHLQMYRSKK IDESNQAMSN QGLFADGRDN IYNLSQLPML QGYNHQRSPF  180
SLRYGDPSWR GHSTSQMYAP YNIGTSSDRS RNGLNFGSLP ERMVFSSTNS NSQAGFNNLF  240
QGQMSNWRTQ QTLKKAPISQ SNNGSSSCQS TSKPRSNMEL NLAISPIQEV AVERKERSNP  300
LNFLKPSNIN IKQGTTNNNH LKRKAMDLDL SLALAPKDID DPLTKKNTKD KE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-51	G2-like family protein