PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022914-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 231aa    MW: 26062.8 Da    PI: 7.0151
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022914-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.1e-1870117253
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                     +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l
  AUR62022914-RA  70 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIIL 117
                     59****999.**********954...5*********************9766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MQQHQMIIKP QQQLILQQQP SSLDSPTSNX XXXXXXXTCN NNVSISPSTA ATTSNKRGRG  60
KGGPDNNKFR YRGVRQRSWG KWVAEIREPR KRTRKWLGTF ATAEDAARAY DRAAIILYDE  120
VDRQTQDQIL LQQQQSHNNG YCTQDYHHRS FCDEISSLVG SVDSSLSLGS QVIGHSDPGL  180
INLLPGSPLT WPTPLAGELE EYQMHHSTSS LWDYGTDPFL FFSDNEHHQI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.11e-23ERF family protein