PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62022837-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 252aa MW: 28453.1 Da PI: 9.1516 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.9 | 4.1e-07 | 113 | 149 | 11 | 47 |
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++ + +++G+g+W+ I+r + +t+ q+ s+ qky AUR62022837-RA 113 RFLLGLQKHGKGDWRNISRNFVISKTPTQVASHAQKY 149 899999****************789***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MGAIYPASLF TNSSYDNWLF PGESKSTIWT KEENKRFEKA LAIFDENTPD RFLRIADMIP 60 GKSVWDVMKQ YKELLEDVTD IEAGLVPIPG YLASPFTLEW VDNGKFDPFR KRRFLLGLQK 120 HGKGDWRNIS RNFVISKTPT QVASHAQKYF LRQSSGGKDK RRPSIHDITT ANLSDNAMPS 180 VSETDEKPKS LLEHSSGSFP LLQKSFNIMP KMLLDWSNTN GEAFMVFDSP HGRQNLYSSA 240 YQGASAYVGS H* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-68 | MYB family protein |