PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022792-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 447aa MW: 50280.3 Da PI: 8.4159

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022792-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	33	1.1e-10	273	311	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 lFe ++yps +++ LA+k+gL+ +qV++WF N R + AUR62022792-RA 273 LFEHflHPYPSDSDKHMLAQKTGLSRSQVSNWFTNARVR 311 5775569******************************98 PP
2	BELL	83.5	2.5e-27	156	217	11	72
BELL 11 kLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 L+s+l+eV+krYk y++q+q +ssFe vaglg+a+p+ +A +a+ rhF+cLk+ai +qi AUR62022792-RA 156 NLVSMLHEVYKRYKLYCQQMQSAVSSFESVAGLGNAAPFLCFAVRAMIRHFQCLKNAILDQI 217 69**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MDDDPYHVPQ QSRRHKLRYH PHHHNHRNND IDIDIVVSQH HHPFLSPLQV LQPTSSASSS 60 ADHPPIMAAA STNLSLSSSS AHARAYLPSP VGPFTGYASI LGRSRFLRPA QEILEEFSRA 120 SGVSFEKQGP YKILEDSGTL FNDTDDDLSL RCSNPNLVSM LHEVYKRYKL YCQQMQSAVS 180 SFESVAGLGN AAPFLCFAVR AMIRHFQCLK NAILDQIRVT SKAFSSSVDT RSDRTPGSCS 240 EDKGPSPNFL QHPVWRSQRG FPDKAVAVLK NWLFEHFLHP YPSDSDKHML AQKTGLSRSQ 300 VSNWFTNARV RLWKPMVEEM HAFERKTQCS KAEDTPKFFS LVTDQQTSLQ PQLSEKDFQI 360 TYSHRDQDNS HCKRSKIEAF PRAEQGKEQF SMLCNRLPNN QVLDVGGSHS GAHISHSSAI 420 GSNQDNTTGL SWSNHGQIVP FWLAKQ*

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MDDDPYHVPQ QSRRHKLRYH PHHHNHRNND IDIDIVVSQH HHPFLSPLQV LQPTSSASSS  60
ADHPPIMAAA STNLSLSSSS AHARAYLPSP VGPFTGYASI LGRSRFLRPA QEILEEFSRA  120
SGVSFEKQGP YKILEDSGTL FNDTDDDLSL RCSNPNLVSM LHEVYKRYKL YCQQMQSAVS  180
SFESVAGLGN AAPFLCFAVR AMIRHFQCLK NAILDQIRVT SKAFSSSVDT RSDRTPGSCS  240
EDKGPSPNFL QHPVWRSQRG FPDKAVAVLK NWLFEHFLHP YPSDSDKHML AQKTGLSRSQ  300
VSNWFTNARV RLWKPMVEEM HAFERKTQCS KAEDTPKFFS LVTDQQTSLQ PQLSEKDFQI  360
TYSHRDQDNS HCKRSKIEAF PRAEQGKEQF SMLCNRLPNN QVLDVGGSHS GAHISHSSAI  420
GSNQDNTTGL SWSNHGQIVP FWLAKQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	3e-67	TALE family protein