PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022770-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 646aa MW: 71651.3 Da PI: 8.0689

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022770-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.6	5.8e-10	453	485	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ ++++ LA+++gLt +qV++WF N R + AUR62022770-RA 453 HPYPTDNDKQMLATQTGLTRNQVSNWFINARVR 485 89*****************************88 PP
2	BELL	96.5	2.3e-31	308	376	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + +++kakLl+++eeV+kr+kqy++q+q+vis+F+ v gl +a+pY+s k+iSrhFrcLk+aia+q+ AUR62022770-RA 308 DCHERKAKLLHMQEEVCKRHKQYHQQMQMVISAFDSVPGLSNATPYISRSIKTISRHFRCLKNAIADQL 376 6789***************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MEMSNNFMPE LHVAQQQRRD KLRVQHIDEL QQLSSFDHLH NSNSNTTTSS MMMLLPAPEM 60 LSFGSASNSF PNIHPTRFVT PSSSDSCDPQ QQPMPPPSCD DNWVQRHVSP SVPQFLIQTQ 120 SHPHELHDYQ SNNNVHQSWG INGGNNELPL LPSNFVNHAN DVGSHPHGHG LSLSLSSNQL 180 CEYRHLGGDP RELKPFESGS ISSVVKQSMS GAGSSIQVHR NVGPLGPFTG YAAILKSSKF 240 LKPAQLMLDE FFSAAGLWRG GEDVGNDQSL AISRSRNVGD CSTVVASKMD GSNELSCKSS 300 SCESYRPDCH ERKAKLLHMQ EEVCKRHKQY HQQMQMVISA FDSVPGLSNA TPYISRSIKT 360 ISRHFRCLKN AIADQLKHIK RALGEDLTSP TSFLRSDSSS SLRYDQNFVK VRSGAIGGTG 420 HVGHQSHVWR PQRGLPERAV SILRAWLFDH FLHPYPTDND KQMLATQTGL TRNQVSNWFI 480 NARVRLWKPM VEEIHMLETK GSSRSESNSN NSVMSIIEKN RQATAANQSG CKSSPLNPVC 540 DKQLECLGPS SSLERSRGEP INTEQLFQNQ KCSRLESHQV PTSIDSSFIG FLPYQRRGLE 600 LGGIGAVSLT LGLRHGSETT QQQLQHQFIP QGMPFGGHVI HDFSG*

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MEMSNNFMPE LHVAQQQRRD KLRVQHIDEL QQLSSFDHLH NSNSNTTTSS MMMLLPAPEM  60
LSFGSASNSF PNIHPTRFVT PSSSDSCDPQ QQPMPPPSCD DNWVQRHVSP SVPQFLIQTQ  120
SHPHELHDYQ SNNNVHQSWG INGGNNELPL LPSNFVNHAN DVGSHPHGHG LSLSLSSNQL  180
CEYRHLGGDP RELKPFESGS ISSVVKQSMS GAGSSIQVHR NVGPLGPFTG YAAILKSSKF  240
LKPAQLMLDE FFSAAGLWRG GEDVGNDQSL AISRSRNVGD CSTVVASKMD GSNELSCKSS  300
SCESYRPDCH ERKAKLLHMQ EEVCKRHKQY HQQMQMVISA FDSVPGLSNA TPYISRSIKT  360
ISRHFRCLKN AIADQLKHIK RALGEDLTSP TSFLRSDSSS SLRYDQNFVK VRSGAIGGTG  420
HVGHQSHVWR PQRGLPERAV SILRAWLFDH FLHPYPTDND KQMLATQTGL TRNQVSNWFI  480
NARVRLWKPM VEEIHMLETK GSSRSESNSN NSVMSIIEKN RQATAANQSG CKSSPLNPVC  540
DKQLECLGPS SSLERSRGEP INTEQLFQNQ KCSRLESHQV PTSIDSSFIG FLPYQRRGLE  600
LGGIGAVSLT LGLRHGSETT QQQLQHQFIP QGMPFGGHVI HDFSG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	8e-86	TALE family protein