PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022751-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 763aa    MW: 83219.3 Da    PI: 6.1508
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022751-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.92.7e-2169124156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe++F+++++p++++r eL+kkl L++rqVk+WFqNrR+++k
  AUR62022751-RA  69 KKRYHRHTPQQIQELEAVFKECPHPDEKQRLELSKKLCLETRQVKFWFQNRRTQMK 124
                     688999***********************************************999 PP
2START189.51.6e-592785031206
                     HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     ela++a++elvk+a+ +ep+W +s      e +n +e+ +++++  +     +  ea r+ g+v+ ++  lve+l+d + +W e+++    +a+t
  AUR62022751-RA 278 ELALAAMDELVKLAQTDEPLWLRSMdaggrEVLNHEEYNRSITSCIGlkpngFVPEATRENGMVIINSLALVETLMDAN-RWAEMFPgmiaRAST 371
                     5899*********************999997788888888876666688888899************************.*************** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     ++vissg      galq+m aelq+lsplvp R + f+R+++q+ +g+w++vdvS+d  ++ + s+ +v +++lpSg+++++++ng+skvtwveh
  AUR62022751-RA 372 TDVISSGmggtrnGALQVMHAELQVLSPLVPvRVVNFLRFCKQHAEGVWAVVDVSIDCIRESSGSPTYVNCRRLPSGCVVQDMPNGYSKVTWVEH 466
                     *************************************************************999******************************* PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++++++h+l+rslv+sg+ +ga++w  tlqrqce+
  AUR62022751-RA 467 AEYDESSIHQLFRSLVSSGMGFGAQRWITTLQRQCEC 503
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 763 aa     Download sequence    
MEGHGEVTAR GTGDQNYDGN GNNNNNGAGV SSIGVRRSRE DEHESRSGSE NLDGASGDEQ  60
DIADLPPRKK RYHRHTPQQI QELEAVFKEC PHPDEKQRLE LSKKLCLETR QVKFWFQNRR  120
TQMKTQLERH ENSILRQEND KLRAENMSIR EAMRNPICTN CGGPAMIGDI SMEEQHLRIE  180
NARLKDELDR VCTLASKFLG RPVSSLSTLS APPMPNSSLE LAVGNNGYGH LTTVTTSSLP  240
LGDFGSGISN AMPVVSPTKS TANVTGMERS FERSMYLELA LAAMDELVKL AQTDEPLWLR  300
SMDAGGREVL NHEEYNRSIT SCIGLKPNGF VPEATRENGM VIINSLALVE TLMDANRWAE  360
MFPGMIARAS TTDVISSGMG GTRNGALQVM HAELQVLSPL VPVRVVNFLR FCKQHAEGVW  420
AVVDVSIDCI RESSGSPTYV NCRRLPSGCV VQDMPNGYSK VTWVEHAEYD ESSIHQLFRS  480
LVSSGMGFGA QRWITTLQRQ CECLAILMSS NIPSGEHTAI TASGHRSMLK LAQRMTNNFC  540
AGVCASTVHK WNKLNIGNVD EDVRVMTRKS IDDPGEPPGI VLSAATSVWL PVSPQRLFDF  600
LRDERLRSEW DILSNGGPMQ EMAHIAKGQD QGNCVSLLRA GAMNPNQSSM LILQETCTDS  660
SGSLVVYAPV DIPAMHVVMN GGDSAYVALL PSGFAIVPDG PGLRGPSNGG PQRVGGSLLT  720
VAFQILVNSL PTAKLTVESV ETVNNLISCT VQKIKAALNC ES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein