PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022715-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HD-ZIP

Protein Properties

Length: 253aa MW: 29184.5 Da PI: 4.7742

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022715-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.9	1.7e-18	32	84	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ft+eq++ Le+ Fe++ ++ +++ + A++lgL+ rqV +WFqN+Ra++k AUR62022715-RA 32 KRRFTDEQVKSLESIFENETKLEPKKKVQVARELGLQPRQVAIWFQNKRARYK 84 568*************************************************9 PP
2	HD-ZIP_I/II	119.2	2.2e-38	31	122	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+++eqvk+LE+ Fe+e+kLep++Kv++areLglqprqva+WFqn+RAR+k+kqlEk+y++Lk++y++l+++ e L+ke+++L +l++ AUR62022715-RA 31 NKRRFTDEQVKSLESIFENETKLEPKKKVQVARELGLQPRQVAIWFQNKRARYKSKQLEKEYSTLKSNYNSLAKRFEDLKKEKQSLVLQLQK 122 69************************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MMFDDGDYYS PSDVFSCINS LPNSKKSKMM NKRRFTDEQV KSLESIFENE TKLEPKKKVQ 60 VARELGLQPR QVAIWFQNKR ARYKSKQLEK EYSTLKSNYN SLAKRFEDLK KEKQSLVLQL 120 QKLKDEAEKN QVERKCYDTN DVTNGIIKSQ PEDEKSESEN NINNHNTKKS KECEAKPALS 180 LEGSEYGACS ILSDEGSSEN TNYFRMEEET DILTMVQPVD GSLTSGEGWD DLRPDGLFDQ 240 AVDSCQWWDF WS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.2	2e-48	HD-ZIP family protein