PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022683-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 735aa MW: 79848.2 Da PI: 5.991

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022683-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ AUR62022683-RA 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MDNYSSGEEP IVKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALVKG VPIGQAIDIE IPPPRPKRKP SNPYPRKTGA ISSPNTQVRA 120 KNGKQIPGSI HTTEEAVDLE KEQFPEEPGG DDGESSPKEI NGGDKCTEAF TLFRKAPSAL 180 GASSNELSAT AMGTARKLSN CKEFVPIRKP LADNETRDLN VADGHNTSHE PDKSDVVEMI 240 QNDSENETNA AKTFPRHAPV HILEGNLASC SQGFSSDVSY QEPAFHPMGI PGQPAFFSNP 300 TISAAVESQT STSKSTNHQM FPNSHPPFSP FPNSQENYSF LQMSSTFSSM IVSALVQNPA 360 AHAAASFAAS FWPCPNLENS ANSPASSNGG LPPRPMNSAP SVAAIAAATV AAATAWWAAH 420 GLLSLFAPLH GGYSFPPASA TAPLANFGQT PPANEENNFQ TPGSQVQQPN QELSVALKPQ 480 HSASKSSATS SSDSGNVISE KMDIGVAADN NEKDVPDLSE QNDTSKGKSK KQVDRSSCGS 540 NTPSGSDIET DALEKVDKEK EEANEPDVSR PTSEPSSRRN RIIGNMYDSW KEVSEGGRLA 600 FQALFSREVL PQSFSPPLNF TGKNQEMNGI VEEYKLHAEE SKNASQLDLN SNTWESCSSN 660 QGVEKIKLRE EDNPKDGLLT FSHEQGKLKT NRTGFKPYKR CSVEARESSR VMNSSAPEQE 720 KCSKRLRLDG EAST*

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MDNYSSGEEP IVKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALVKG VPIGQAIDIE IPPPRPKRKP SNPYPRKTGA ISSPNTQVRA  120
KNGKQIPGSI HTTEEAVDLE KEQFPEEPGG DDGESSPKEI NGGDKCTEAF TLFRKAPSAL  180
GASSNELSAT AMGTARKLSN CKEFVPIRKP LADNETRDLN VADGHNTSHE PDKSDVVEMI  240
QNDSENETNA AKTFPRHAPV HILEGNLASC SQGFSSDVSY QEPAFHPMGI PGQPAFFSNP  300
TISAAVESQT STSKSTNHQM FPNSHPPFSP FPNSQENYSF LQMSSTFSSM IVSALVQNPA  360
AHAAASFAAS FWPCPNLENS ANSPASSNGG LPPRPMNSAP SVAAIAAATV AAATAWWAAH  420
GLLSLFAPLH GGYSFPPASA TAPLANFGQT PPANEENNFQ TPGSQVQQPN QELSVALKPQ  480
HSASKSSATS SSDSGNVISE KMDIGVAADN NEKDVPDLSE QNDTSKGKSK KQVDRSSCGS  540
NTPSGSDIET DALEKVDKEK EEANEPDVSR PTSEPSSRRN RIIGNMYDSW KEVSEGGRLA  600
FQALFSREVL PQSFSPPLNF TGKNQEMNGI VEEYKLHAEE SKNASQLDLN SNTWESCSSN  660
QGVEKIKLRE EDNPKDGLLT FSHEQGKLKT NRTGFKPYKR CSVEARESSR VMNSSAPEQE  720
KCSKRLRLDG EAST*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-101	MYB_related family protein