PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022486-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 387aa MW: 43144.3 Da PI: 7.4576

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022486-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.2	3.5e-28	13	158	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..........leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratk 79 lppG+rF P++e+l+++yL++k + ++ + ++ike+++y+++P dLp+ + +++++wy F++r + +++r nr + AUR62022486-RA 13 LPPGCRFYPSEEQLLSYYLRHKNHLNSplqssssssnADYYDAIKEINLYNYNPFDLPEltcfrfGCGGRKRHWYCFTERVNGG-EEDRGNRRAG 106 79******************988887666655544444459***********657776644557789*9998865.678999999 PP NAM 80 sgyWkatgkdkevlsk.kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 gyWk +g+ ++v+ + ++ g +k ++fy k + +++++tdW+m ey+l AUR62022486-RA 107 IGYWKRKGRVRDVMGNgGNVILGRRKCFIFYleKLNGKTAVRTDWFMYEYAL 158 *************9445558*****7655888899*******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MGDPKAALSP SILPPGCRFY PSEEQLLSYY LRHKNHLNSP LQSSSSSSNA DYYDAIKEIN 60 LYNYNPFDLP ELTCFRFGCG GRKRHWYCFT ERVNGGEEDR GNRRAGIGYW KRKGRVRDVM 120 GNGGNVILGR RKCFIFYLEK LNGKTAVRTD WFMYEYALID NFKASFVVCR VFVKSNGRNS 180 ISEHALSSCA EESIATVRHI GIQHDSSTVS VLDEDKAHGF YYVNGMIAGQ PTKLMEETEP 240 NIPVKSPGHV GSADLVNSSS PRHLVSNLER DFIDYVEGDW NCCFSTVHIL LLLQLCTSEI 300 GIPPKSALMN LIMGTLLTEA KFDNAVAGRV FLLKASLVHT DWGIIPNCGE SVLDEALLRK 360 CLLFALFKSL LGPGGNAFES EIRIVL*

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MGDPKAALSP SILPPGCRFY PSEEQLLSYY LRHKNHLNSP LQSSSSSSNA DYYDAIKEIN  60
LYNYNPFDLP ELTCFRFGCG GRKRHWYCFT ERVNGGEEDR GNRRAGIGYW KRKGRVRDVM  120
GNGGNVILGR RKCFIFYLEK LNGKTAVRTD WFMYEYALID NFKASFVVCR VFVKSNGRNS  180
ISEHALSSCA EESIATVRHI GIQHDSSTVS VLDEDKAHGF YYVNGMIAGQ PTKLMEETEP  240
NIPVKSPGHV GSADLVNSSS PRHLVSNLER DFIDYVEGDW NCCFSTVHIL LLLQLCTSEI  300
GIPPKSALMN LIMGTLLTEA KFDNAVAGRV FLLKASLVHT DWGIIPNCGE SVLDEALLRK  360
CLLFALFKSL LGPGGNAFES EIRIVL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	2e-23	NAC family protein