PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022453-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 274aa    MW: 29023.3 Da    PI: 4.9638
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022453-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00057131142112
                     EEETTTTEEESS CS
         zf-C2H2   1 ykCpdCgksFsr 12 
                     y+C+ Cgk+Fs+
  AUR62022453-RA 131 YECKTCGKTFSS 142
                     99********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MITTTTNASY KSDEGSDICS NNNVAEEMTT GTTTTIASDD DDIYYNGGGS GTAASTTEEE  60
EDMANCLILL AQGHSRDLTP QHPPLLSLVD DHQTYRTNNN NIVSSNGSSK FVSRKFMETS  120
STTGKSGYYV YECKTCGKTF SSFQALGEFS SGQALGGHMR RHRGPVSAAV GAAAAPVIRA  180
VPLSVEKAPA AATEMSEEMM ITAMKIPPVR NTSTSLLSLL DLNLPAPAED NAGKITSHDP  240
ISKELDRNTV REVHSSLCLP SLAWSKPYGL VAS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.11e-19C2H2 family protein