PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62022423-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 230aa MW: 25685.2 Da PI: 9.4938 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.4 | 1.7e-15 | 134 | 220 | 4 | 98 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ps+v+ +l lp +f++++ + +++ ++tl de+++++ v + rk++ l++GWk+F+++++L +gD v+F+++++s +v ++r AUR62022423-RA 134 PMLPSHVTGGFWLGLPTDFCRRNL-P-TNDGMVTLVDEENEEYPVVYLARKRG----LSGGWKGFAESHELVDGDAVIFQVISSSVL--KVYIIR 220 6899****************9994.3.34459***************555555....9**********************8875555..888877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MGIGKTSYEE RRQKRVEENK KRLEDLNLIH LSQALKTLSP KSSPMKKVGK PRIFDKQTVE 60 VRRSARVASN PAPVYAEISL PRFSSPRKSY GVVKARDFTN RVIASDDVRE YAIEEAEKLN 120 AKLEEEGFPT LVRPMLPSHV TGGFWLGLPT DFCRRNLPTN DGMVTLVDEE NEEYPVVYLA 180 RKRGLSGGWK GFAESHELVD GDAVIFQVIS SSVLKVYIIR GSGQDSGTD* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 11 | 50 | RRQKRVEENKKRLEDLNLIHLSQALKTLSPKSSPMKKVGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 6e-63 | B3 family protein |