PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62022366-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 251aa MW: 28764.6 Da PI: 9.5954 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.2 | 7.1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdae+a+i+fss+g++ye+s+ AUR62022366-RA 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEIALIVFSSRGRVYEFSN 59 79***********************************************95 PP | |||||||
2 | K-box | 104.3 | 1.6e-34 | 74 | 171 | 4 | 100 |
K-box 4 ssgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 s+g++ ++e +a+++q+e+akL+++i+++q+++R+l+Ge+L+sL++keL+q+e++Le+++++iRskK+e ll++ie qk+e el++en Lr+k AUR62022366-RA 74 SDGTNtVTEINAQYYQHESAKLRNQIQMMQNSNRNLMGECLSSLTVKELKQVENRLERGISRIRSKKHEALLAEIEFRQKREAELENENSILRAK 168 455556999************************************************************************************** PP K-box 98 lee 100 ++e AUR62022366-RA 169 IAE 171 986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEIALIVFSS RGRVYEFSNN 60 NIRSTIEKYK KANSDGTNTV TEINAQYYQH ESAKLRNQIQ MMQNSNRNLM GECLSSLTVK 120 ELKQVENRLE RGISRIRSKK HEALLAEIEF RQKREAELEN ENSILRAKIA EVERLQQLNM 180 MPSETLDFVN PFVPRDHLLA ENMLQNCSEF ANANSEKKLF HLRFETVENS DAGKSKNAGS 240 SEQVQTKNGT * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 1e-101 | MIKC_MADS family protein |