PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022184-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 836aa    MW: 91875.4 Da    PI: 6.312
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022184-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.36.5e-191674357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  AUR62022184-RA 16 KYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 74
                    5679*****************************************************97 PP
2START179.61.8e-561603682205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+ ++  g+++l 
  AUR62022184-RA 160 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVLNVLPTAngGTVELL 253
                     7899******************************************************.8888888888****************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  +++g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  AUR62022184-RA 254 YMQLYAPTTLAPaRDFWLLRYTSVMEDGSLVVCERSLNNTQNGPSmptVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 348
                     ********************************************999889********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++kt++a+l+++++
  AUR62022184-RA 349 ESSTVIAQKTTMAALRQLRQ 368
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 836 aa     Download sequence    
MAMSCKDGKG VMDNGKYVRY TPEQVEALER LYHECPKPSS LRRQQLIREC PILSNIEPKQ  60
IKVWFQNRRC REKQRKEASR LQAVNRKLTA MNKLLMEEND RLQKQVSQLV YENGYFRQQT  120
NKSGIASKDT SCESVVTSGQ HHLTPQNPPR DASPAGLLSI AEETLAEFLS KATGTAVEWV  180
QMPGMKPGPD SIGIVAISHG CTGVAARACG LVGLEPTRVA EILKDRPSWF RDCRAVDVLN  240
VLPTANGGTV ELLYMQLYAP TTLAPARDFW LLRYTSVMED GSLVVCERSL NNTQNGPSMP  300
TVQNFVRAEM LPSGYLIRPC EGGGSIIHIV DHMDLEPWSV PEVLRPLYES STVIAQKTTM  360
AALRQLRQIA QEVSQPNVSN WGRRPAALRA LSQRLSRGFN EALNGFTDEG WSMIGNDGID  420
DVTVLVNSSP DKLMALNLTF ANGFPAVSNT VLCAKASMLL QNVPPAVLLR FLREHRSEWA  480
DNNIDAYLAA AAKISPCSLP GSRIGGFGNQ VILPLAHTIE HEELLEVIKL EGVVSCPEDA  540
MMPRDMFLLQ LCSGMDENAV GTCAELIFAP IDASFADDAP LLPSGFRIIP LDSVKETSSP  600
NRTLDLASAL EVGSSANRSS DHSASGNSMR SVMTIAFQFA FESHLQDNVA SMARQYVRSI  660
ISSVQRVALA LSPHLGSQAG LRSPLGNPEA HTLARWICQS YRCFLGVELL KSPGEGNDVV  720
LKTLWHHSDA IMCCSLKALP VFTFANQAGL DMLETTLVAL QDITLEKILD DQGRKTLCSE  780
FPQILQQGFA CLQGGICLSS MGRPVSYERA VAWKVLNEEE NAHCICFMFM NWSFV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein