PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021994-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 735aa    MW: 80527.3 Da    PI: 5.8888
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021994-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox611.8e-1960115156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++l+L+  qVk+WFqN+R+++k
  AUR62021994-RA  60 KKRYHRHTQHQIQEMENFFKECPHPDDKQRKELSRRLSLEPLQVKFWFQNKRTQMK 115
                     688999***********************************************998 PP
2START216.31.1e-672544741206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+++a+a++p+W  s+    e++n++e+ ++f+++ +      ++ea+r+s+vv+m++++lve+l+d++ qW+  +     +a+tl
  AUR62021994-RA 254 ELAVAAMEELIRMAQAGDPLWIPSAdnstEILNEEEYFRTFPRGIGpmplgLKSEASRDSAVVIMNHMNLVEILMDVN-QWSCVFSgivsRAMTL 347
                     57899**************************************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+ae+q++splvp R+ +fvRy++q+g+ +w++vdvS+d  ++ p    + R++++pSg+li++++ng+skv wvehv
  AUR62021994-RA 348 EVLSTGvagnynGALQVMTAEFQVPSPLVPtRENYFVRYCKQHGDSTWAVVDVSLDGLRPSP----IPRCRRRPSGCLIQELPNGYSKVMWVEHV 438
                     ************************************************************99....6**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+++r lv+sgla+gak+wv++l+rqce+
  AUR62021994-RA 439 EVDDRAVHNIYRALVNSGLAFGAKRWVSALDRQCER 474
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
MFQPNMFETH HQLLDMSGHK TPDSELGKMR DDEFESSRSA TENLEGLSGD DQDPNQRPKK  60
KRYHRHTQHQ IQEMENFFKE CPHPDDKQRK ELSRRLSLEP LQVKFWFQNK RTQMKAQHER  120
SENQQLRNEN EKLRADNIRF KEALSNATCP NCGGPAAIGE MSFDEQQLRI ENARLREEID  180
RISGIAAKYV GKPLVTYPHN LQSQGLQPSR SSLDLGVGSY GPQSGMVGDI YGSAGDLIRS  240
VAPPTEADKP MIIELAVAAM EELIRMAQAG DPLWIPSADN STEILNEEEY FRTFPRGIGP  300
MPLGLKSEAS RDSAVVIMNH MNLVEILMDV NQWSCVFSGI VSRAMTLEVL STGVAGNYNG  360
ALQVMTAEFQ VPSPLVPTRE NYFVRYCKQH GDSTWAVVDV SLDGLRPSPI PRCRRRPSGC  420
LIQELPNGYS KVMWVEHVEV DDRAVHNIYR ALVNSGLAFG AKRWVSALDR QCERLASVMA  480
SNMPAGEGGV ITSPEGRKSM LKLAERMVMS FCAGVGASTA HTWTTLSGSG ADDVRVMTRK  540
SMDDPGRPPG IVLSAATSFW MPVSPKRVFD FLRDENSRSE WDILSNGGLV QEMAHIANGR  600
DPGNCVSLLR VNSANSSQSN MLILQESSTD PTGSYVIYAP VDIVAMNVVL NGGDPDYVAL  660
LPSGFAILPD GPVGAHGGGP LEVGSGGSLL TVAFQILVDS VPTAKLSLGS VATVNSLIKC  720
TVERIKAAVA CENP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein