PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021960-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 344aa    MW: 38431.2 Da    PI: 4.8295
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021960-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.83.3e-10114158347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       W+++E+ l+v + +++G g Wk+I+r + ++R++ q+ s+ qk+
   AUR62021960-RA 114 QWSKDEHRLFVIGLELYGLGAWKSISRWVVLTRSATQVASHAQKF 158
                      5******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MHLSTNNFPS TSNSDYIQWT PEENKNFEKC LTLHDLYNMD ANSFFQQISK LLGQSRTPQE  60
VKLHFDQLLY DLGRIEAGLA DYFPPRWYEE ENSCRVIPTH PDKKKKNSSK GGAQWSKDEH  120
RLFVIGLELY GLGAWKSISR WVVLTRSATQ VASHAQKFCN KKNCPKVTKR SSIHNITTVS  180
VDEAHDLCRK GKLSPQILDA YLQKLGYGPD QQEAHTSEPL ETLASGCVQQ EAYVQEPLNT  240
LASGCVQQEA YVAEPLNTLA SGCVQQEAYV AEPLNTLASG CVQQEAYVAE PLNTLASGCV  300
QQEAYVPEPL NTLASDCYQQ EMDESELEML LKDPVLELAS SLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.14e-27MYB family protein