PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021901-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 425aa MW: 48640.9 Da PI: 9.9483

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021901-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	346	380	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ AUR62021901-RA 346 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 380 569*****************************885 PP
2	ELK	39.7	1e-13	300	321	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsL+qEF+ AUR62021901-RA 300 ELKGQLLRKYSGYLGSLRQEFL 321 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MQWRLDNELV VVPFSGPLFT WTNNRLDSDP IFERLDRAYA SPSWMLNYPD TSVVHQPILF 60 SDHAAIVLSD VVSTIRSSRP YRIENWCLSA AEVHSIISST LLQFQAGSPM YSLSRKLQVL 120 KGRLLAWCVS HRKLWGVDWK TLATELGDSE SDLQHRSQRR LFLNLRNEKL AAAQVAFSYW 180 CQRAKVRWNA LGERHSKLLF SSVHARRRRN AIHSLKDTSG QWITDAHGIH NVISSFYSDL 240 YTPSSSTPIP ESGRSTTGSG GKTRRGRGNA CGEIPDRNGS SEEDIDVNNN FIDPSAEDRE 300 LKGQLLRKYS GYLGSLRQEF LKKRKKGKLP KEARQQLLDW WSRHYKWPYP SESQKLALAE 360 STGLDQKQIN NWFINQRKRH WKPSEDMQFV VMDAAAHSHA HSHYGYMDNV LGNPFPMDVS 420 PTLM*

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MQWRLDNELV VVPFSGPLFT WTNNRLDSDP IFERLDRAYA SPSWMLNYPD TSVVHQPILF  60
SDHAAIVLSD VVSTIRSSRP YRIENWCLSA AEVHSIISST LLQFQAGSPM YSLSRKLQVL  120
KGRLLAWCVS HRKLWGVDWK TLATELGDSE SDLQHRSQRR LFLNLRNEKL AAAQVAFSYW  180
CQRAKVRWNA LGERHSKLLF SSVHARRRRN AIHSLKDTSG QWITDAHGIH NVISSFYSDL  240
YTPSSSTPIP ESGRSTTGSG GKTRRGRGNA CGEIPDRNGS SEEDIDVNNN FIDPSAEDRE  300
LKGQLLRKYS GYLGSLRQEF LKKRKKGKLP KEARQQLLDW WSRHYKWPYP SESQKLALAE  360
STGLDQKQIN NWFINQRKRH WKPSEDMQFV VMDAAAHSHA HSHYGYMDNV LGNPFPMDVS  420
PTLM*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	325	LRQEFLKKRK
2	322	326	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	6e-74	TALE family protein