PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021833-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 545aa    MW: 61079.9 Da    PI: 6.3253
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021833-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS422.53.5e-1291745441374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+++L+ cA+avs++d + a++l+  l +++s  g+pmqRlaay++e+L+arl +s+ ++yk+l++++ +   sse l++++++++v+P++kf++
  AUR62021833-RA 174 LKQVLFLCAQAVSEKDVSTAETLMDALDKMVSVCGTPMQRLAAYMLEGLRARLESSGYTIYKKLRCEQPT---SSELLTYMHILYQVCPYFKFAY 265
                     5799*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN  I eav +e  +HiiDf+i++G+QW++L+q+L +Rp+gpp +RiTgv++++s+  +   le +++rL+  A++ +vpfef++ +a +  +
  AUR62021833-RA 266 MSANLIIQEAVGHEGSIHIIDFQIGMGTQWLSLIQSLGNRPGGPPLVRITGVDDSQSVlaRGAGLELVEKRLSMEAKQWNVPFEFHA-AAMSGCE 359
                     ******************************************************9999999**************************.89999** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ e+L+++pgEalaVn+ ++lh+++desvs+e++rd++L+lvk+lsP++v+vveqe+++n+++Fl+rf+e+l+yy+a+++s+++ l+r +++ri
  AUR62021833-RA 360 VKRENLSIRPGEALAVNFPYMLHHMPDESVSTENHRDRLLRLVKELSPRIVTVVEQESNTNTSPFLNRFAETLDYYTAMYESVDVALARGDKKRI 454
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + E ++l+r+ivn++ace a+r+erhe ++kWr+rl++aGF+++pls+++ + ++ l+++++++ yr++e +g+l+lgWk+r L s SaWr
  AUR62021833-RA 455 NAEMHCLARDIVNMIACEDAQRVERHEPFGKWRARLNMAGFTQLPLSYTVIDGVRGLMKEFHGN-YRLQEWHGALFLGWKNRILSSSSAWR 544
                     **************************************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    
MQTSQHNCAT SGVHGFLYQH APDITPYCSS HYQVFDNNMY PNNTTQGNQI SFQNFNEGYI  60
TLDSGQNAGL YNIYDSPSGV STSSNRSQFS PQGSQSYISD PPQSSDNTYG SPMSNSSVVD  120
DNTELRNQLR ELERSLLGPD SPRLIDGHYC SLSHGGNHGP SSNQLMEMLP KMDLKQVLFL  180
CAQAVSEKDV STAETLMDAL DKMVSVCGTP MQRLAAYMLE GLRARLESSG YTIYKKLRCE  240
QPTSSELLTY MHILYQVCPY FKFAYMSANL IIQEAVGHEG SIHIIDFQIG MGTQWLSLIQ  300
SLGNRPGGPP LVRITGVDDS QSVLARGAGL ELVEKRLSME AKQWNVPFEF HAAAMSGCEV  360
KRENLSIRPG EALAVNFPYM LHHMPDESVS TENHRDRLLR LVKELSPRIV TVVEQESNTN  420
TSPFLNRFAE TLDYYTAMYE SVDVALARGD KKRINAEMHC LARDIVNMIA CEDAQRVERH  480
EPFGKWRARL NMAGFTQLPL SYTVIDGVRG LMKEFHGNYR LQEWHGALFL GWKNRILSSS  540
SAWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein