PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021827-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 508aa MW: 57747.2 Da PI: 6.1266

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021827-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40	8.9e-13	105	147	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W ++E+ ll+++ +++G g+W+ +a+++g ++ +qc++++++ AUR62021827-RA 105 DWNADEEILLLEGLEMYGLGNWAEVAEHVG-TKNKEQCINHYRS 147 6***************************.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MGRSRVFHSD EDPTQRSRRK KNVSSGESIE SALGGQGTGD GKKALYHCNY CNKDITGRIR 60 IKCAMCPDFD LCIECFSVGV EMTPHKSNHP YRVMDSLSFP LISPDWNADE EILLLEGLEM 120 YGLGNWAEVA EHVGTKNKEQ CINHYRSVYL NSPFFPLPDM SHVVGKNRND LLAMAKENDE 180 DRKGSTLFGD HIVKTEPTFS PSRVKVDELP KGGPPSRLLS VQNADSHVNP IGKKPPKEED 240 SSLVSLSGFS LKRHEFDPEY DIDAEQLLAE MEFKDADTED ERELKLRVLR IYSKRLDERN 300 RRKDFIFERN LLHPSPFEKD LSPEEKAICR RYDPFMRFHS KEEHEDMLQA VIAEHRTHKR 360 ILELEEARAV GCRTSAEADK YFELKRKREA EESSRRAKES AQLGPASQLG QNAAMTSETV 420 KDPGSLIHEL DIGRYPGEEL LSEAEKQLCH ETKISPHQYL KMQETISVKI FSGNVTSNVD 480 AHCLFDIEPG KIDRIYDMLI RKGVAPP*

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MGRSRVFHSD EDPTQRSRRK KNVSSGESIE SALGGQGTGD GKKALYHCNY CNKDITGRIR  60
IKCAMCPDFD LCIECFSVGV EMTPHKSNHP YRVMDSLSFP LISPDWNADE EILLLEGLEM  120
YGLGNWAEVA EHVGTKNKEQ CINHYRSVYL NSPFFPLPDM SHVVGKNRND LLAMAKENDE  180
DRKGSTLFGD HIVKTEPTFS PSRVKVDELP KGGPPSRLLS VQNADSHVNP IGKKPPKEED  240
SSLVSLSGFS LKRHEFDPEY DIDAEQLLAE MEFKDADTED ERELKLRVLR IYSKRLDERN  300
RRKDFIFERN LLHPSPFEKD LSPEEKAICR RYDPFMRFHS KEEHEDMLQA VIAEHRTHKR  360
ILELEEARAV GCRTSAEADK YFELKRKREA EESSRRAKES AQLGPASQLG QNAAMTSETV  420
KDPGSLIHEL DIGRYPGEEL LSEAEKQLCH ETKISPHQYL KMQETISVKI FSGNVTSNVD  480
AHCLFDIEPG KIDRIYDMLI RKGVAPP*