PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021729-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 510aa MW: 57377.2 Da PI: 7.9679

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021729-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	63	5.3e-20	264	306	1	42
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-S CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversa 42 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v + + AUR62021729-RA 264 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVVTMS 306 58*************************99*****97665 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MTTTSMEQQQ HGGANSSQDE GKIKEENDSN NNRRKRVESS SSPSTSFNDE THKNDESLTQ 60 STDERNIKKD SDVDKQGKEL ESTKAEIGEV MEENQRLKQY LNKMMTDYQM LQSKFHEISQ 120 QDSKQLKIMA ATPPPPSRAS CDEDEEEADK ELVSLSLGRS PSLDSKKGYT NKLSSPSKLA 180 TNHSKYVDME ANERSLDLGL ECKFKASSTT DHPQNLNETK YSEALKSNNV TTGGNSNGDD 240 ELVHQPPMKK ARVSVRVRCD TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK 300 QVVTMSTPSR KRLMRDFKRL QQDPPAGISG APHDNNIMLW NAVIFGPDDT PWDGDGSFVY 360 VVIVDHHLSL LSFSVSVLHY GHVYRSSFHG GKWLVWFVKK ILSEELSRTA LKSGLKAVII 420 VKRRMRTYQA IVKVTSNFYA DGSICLDILQ NQWSPIYDVA AILTSIQSLL CDPNPNSPAN 480 SEAARLFSEN KREYNRRVRE IVEQSWTAD*

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MTTTSMEQQQ HGGANSSQDE GKIKEENDSN NNRRKRVESS SSPSTSFNDE THKNDESLTQ  60
STDERNIKKD SDVDKQGKEL ESTKAEIGEV MEENQRLKQY LNKMMTDYQM LQSKFHEISQ  120
QDSKQLKIMA ATPPPPSRAS CDEDEEEADK ELVSLSLGRS PSLDSKKGYT NKLSSPSKLA  180
TNHSKYVDME ANERSLDLGL ECKFKASSTT DHPQNLNETK YSEALKSNNV TTGGNSNGDD  240
ELVHQPPMKK ARVSVRVRCD TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK  300
QVVTMSTPSR KRLMRDFKRL QQDPPAGISG APHDNNIMLW NAVIFGPDDT PWDGDGSFVY  360
VVIVDHHLSL LSFSVSVLHY GHVYRSSFHG GKWLVWFVKK ILSEELSRTA LKSGLKAVII  420
VKRRMRTYQA IVKVTSNFYA DGSICLDILQ NQWSPIYDVA AILTSIQSLL CDPNPNSPAN  480
SEAARLFSEN KREYNRRVRE IVEQSWTAD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-40	WRKY family protein